Variants linked to Crohn's Disease

Continuously updated · newest added Oct 21, 2026

107 positions on this site are linked to Crohn's Disease, out of 102,854 published in total. Each was published only after passing the same quality gate; being on this list is an association, not a diagnosis.

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Sensitive

Crohn's disease

REL · rs10181042

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Sensitive

Crohn's disease

HLA-DQB1 · rs140068907

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Sensitive

Crohn's disease

PTPRC · rs7555082

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Sensitive

Crohn's disease

CCR6 · rs2301436

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Sensitive

Crohn's disease

SPRED1 · rs16967103

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Sensitive

Crohn's disease

near TRIB1 · rs4871611

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Sensitive

Crohn's disease

UBD · rs9258260

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Sensitive

Crohn's disease

IL3 · rs3091338

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Sensitive

Crohn's disease

KLF3 · rs6856616

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Sensitive

Crohn's disease

NOD2 · rs17221417

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Sensitive

Crohn's disease

TMEM17 · rs6545946

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Sensitive

Crohn's disease

HLA-DRA · rs10947261

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Sensitive

Crohn's disease

near GIPC2 · rs17391694

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Sensitive

Crohn's disease

SP140 · rs7423615

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Sensitive

Crohn's disease

IL2RA · rs12722489

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Sensitive

Crohn's disease

near TMEM174 · rs7702331

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Sensitive

Crohn's disease

HLA-DQA2 · rs7765379

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Sensitive

Crohn's disease

SLAIN2 · rs7438704

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Sensitive

Crohn's disease

AKAP11 · rs80244186

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Sensitive

Crohn's disease

LOC100129633 · rs6478106

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Questions about variants on this site

What is a "variant" page on this site?

One specific position in the genome (an rsID), explained in plain language with what published research has found it linked to, and how strong that link actually is.

Where does new variant data come from?

The public GWAS Catalog, checked every twenty minutes, plus variants added manually after research review. Every one passes the same quality gate before publishing.

Does being listed here mean a variant causes a condition?

No. Listing reflects an association from published research, not a diagnosis or a cause. Most common variants shift probability modestly rather than determining an outcome.

Can I search this list by gene or rsID?

Yes — the search box above matches gene symbols and rsIDs as well as trait names.