Variants linked to Crohn's Disease

Continuously updated · newest added Oct 21, 2026

107 positions on this site are linked to Crohn's Disease, out of 102,686 published in total. Each was published only after passing the same quality gate; being on this list is an association, not a diagnosis.

← Back to Crohn's Disease

Sensitive

Crohn's disease

near RNU4ATAC4P · rs12033764

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Sensitive

Crohn's disease

near ALDH7A1P4 · rs224135

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Sensitive

Bipolar disorder or Crohn's disease (MTAG)

near TSBP1-AS1 · rs380571

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Sensitive

Bipolar disorder or Crohn's disease (MTAG)

MSRA · rs28653100

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Standard

Regional enteritis (PheCode 555.1)

near LINC01734 · rs191293575

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Standard

Regional enteritis (PheCode 555.1)

near MTHFD2P1 · rs540193863

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Standard

Regional enteritis (PheCode 555.1)

NMT1 · rs369013158

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Sensitive

Takes medication for Crohn's disease?

near MGMT · rs185658725

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Standard

Regional enteritis (PheCode 555.1)

near SUB1 · rs946573151

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Sensitive

Takes medication for Crohn's disease?

VWF · rs550831531

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Standard

Regional enteritis (PheCode 555.1)

SMIM3 · rs76872831

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Standard

Regional enteritis (PheCode 555.1)

CEACAM20 · rs111978729

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Standard

Regional enteritis (PheCode 555.1)

near TTC33 · rs1992660

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Sensitive

Crohn's disease

RBMS2 · rs576910164

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Sensitive

Crohn's disease

LINC02513 · rs73243351

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Sensitive

Crohn's disease

LINC02694 · rs7171171

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Sensitive

Crohn's disease

near TNF · rs361525

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Sensitive

Crohn's disease

near NKX2-3 · rs10786560

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Standard

Regional enteritis (PheCode 555.1)

NKD1 · rs146528649

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Sensitive

Crohn's disease

near TNFSF15 · rs56211063

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Questions about variants on this site

What is a "variant" page on this site?

One specific position in the genome (an rsID), explained in plain language with what published research has found it linked to, and how strong that link actually is.

Where does new variant data come from?

The public GWAS Catalog, checked every twenty minutes, plus variants added manually after research review. Every one passes the same quality gate before publishing.

Does being listed here mean a variant causes a condition?

No. Listing reflects an association from published research, not a diagnosis or a cause. Most common variants shift probability modestly rather than determining an outcome.

Can I search this list by gene or rsID?

Yes — the search box above matches gene symbols and rsIDs as well as trait names.