Gene Knowledge Graph
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Variants linked to Cholesterol (LDL, HDL and Total)

Continuously updated · newest added Nov 8, 2026

1,538 positions on this site are linked to Cholesterol (LDL, HDL and Total), out of 2,506,722 published in total. Each was published only after passing the same quality gate; being on this list is an association, not a diagnosis.

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Recommended (connected, strongest) Strongest evidence Newest Oldest

Strength of the evidence: all 2+ 3+ 4 Connections: all only those linked to a condition, drug or sense

← Back to Cholesterol (LDL, HDL and Total)

Standard

LDL cholesterol

CELSR2 · rs12740374

See detailed info → Standard

HDL cholesterol

FADS1 · rs174546

See detailed info → Standard

HDL cholesterol

near BUD13 · rs11216126

See detailed info → Standard

LDL cholesterol

HMGCR · rs7703051

See detailed info → Standard

LDL cholesterol

NCAN · rs16996148

See detailed info → Standard

LDL cholesterol

NCAN · rs10401969

See detailed info → Standard

LDL cholesterol

APOE · rs4420638

See detailed info → Standard

HDL cholesterol

ABCA1 · rs1883025

See detailed info → Standard

HDL cholesterol

CETP · rs3764261

See detailed info → Standard

HDL cholesterol

RBM6 · rs6792892

See detailed info → Standard

HDL cholesterol

LRP4 · rs3136441

See detailed info → Standard

LDL cholesterol

SUGP1 · rs138295924

See detailed info → Standard

Low density lipoprotein cholesterol levels

MTTP · rs28497720

See detailed info → Standard

Total cholesterol levels

PTPRJ · rs7106731

See detailed info → Standard

High density lipoprotein cholesterol levels

LIPG · rs3744841

See detailed info → Standard

HDL cholesterol

near TRIM48 · rs28872512

See detailed info → Standard

Total cholesterol levels

near UBASH3B · rs7930518

See detailed info → Standard

Total cholesterol levels

DNAJC13 · rs77682405

See detailed info → Standard

High density lipoprotein cholesterol levels

near Y_RNA · rs4847419

See detailed info → Standard

Total cholesterol levels

ASAP3 · rs7551124

See detailed info →

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Questions about variants on this site

What is a "variant" page on this site?

One specific position in the genome (an rsID), explained in plain language with what published research has found it linked to, and how strong that link actually is.

Where does new variant data come from?

The public GWAS Catalog, checked every twenty minutes, plus variants added manually after research review. Every one passes the same quality gate before publishing.

Does being listed here mean a variant causes a condition?

No. Listing reflects an association from published research, not a diagnosis or a cause. Most common variants shift probability modestly rather than determining an outcome.

Can I search this list by gene or rsID?

Yes — the search box above matches gene symbols and rsIDs as well as trait names.