Standard

HDL cholesterol

FADS1 · rs174546

Where this position leads

Condition: Cholesterol (LDL, HDL and Total)

Supplement: Omega-3 fatty acids (fish oil)

rs174546 Condition: Cholesterol (LDL, HDL and Total) Cholesterol (LDL, HDL and Total) Condition Supplement: Omega-3 fatty acids (fish oil) Omega-3 fatty acids (fish oil) Supplement Topic: Cholesterol and blood fats Cholesterol and blood fats Topic Topic: Blood sugar and insulin Blood sugar and insulin Topic rs174546 rs174546 FADS1

Solid lines are connections this site curates. Dashed lines mean the two ends share a research paper — worth knowing, and not a claim that one explains the other.

What the study found

Who was studied 99,900 European ancestry individuals.

The effect Each copy of the T allele shifted the measure 0.73 mg/dL lower (95% confidence interval 0.57-0.89); p = 2 × 10−22.

How common The T allele had a frequency of about 36% in the people studied.

Where it sits Chromosome 11, band 11q12.2 — in the 3′ untranslated region of FADS1.

What each result means

C/C No copy of the version the research linked to HDL cholesterol. This is the starting point the study compared everyone against.
C/T One copy of the version the research linked to HDL cholesterol. That is a smaller link than two copies.
T/T Two copies of the version the research linked to HDL cholesterol. That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

What people read about alongside this

Papers in Europe PMC whose title or abstract names both this rsID and that subject. A shared paper means somebody wrote about the two together — it is not a claim that this position explains the subject.

Questions about rs174546

What is rs174546?

rs174546 is a single position in the genome, in or near the FADS1 gene. Published research associates it with hdl cholesterol. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs174546 linked to?

On MyGeneLog this position is linked to Cholesterol (LDL, HDL and Total). The research behind each link, and its sources, are set out on that condition page.

What do people read about alongside rs174546?

Subjects that appear in the title or abstract of the same papers as this rsID include cholesterol and blood fats (9 papers), blood sugar and insulin (3 papers), heart and circulation (2 papers), allergies (1 papers), depression and stress (1 papers). A shared paper means somebody wrote about the two together; it is not a claim that this position explains the topic.

Does having rs174546 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs174546 come from?

GWAS Catalog, Nature 2010, PMID:20686565. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

HDL cholesterol (rs174546). MyGeneLog™. https://www.mygenelog.com/variants/rs174546

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