Gene Knowledge Graph
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Variants linked to Cholesterol (LDL, HDL and Total)

Continuously updated · newest added Nov 8, 2026

1,538 positions on this site are linked to Cholesterol (LDL, HDL and Total), out of 2,506,432 published in total. Each was published only after passing the same quality gate; being on this list is an association, not a diagnosis.

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Recommended (connected, strongest) Strongest evidence Newest Oldest

Strength of the evidence: all 2+ 3+ 4 Connections: all only those linked to a condition, drug or sense

← Back to Cholesterol (LDL, HDL and Total)

Standard

LDL cholesterol

near MIR3143 · rs71559014

See detailed info → Standard

Citrate levels

SFXN2 · rs2265309

See detailed info → Standard

Total cholesterol levels

near FCGR3A · rs115383270

See detailed info → Standard

Low density lipoprotein cholesterol levels

COL4A2 · rs4771674

See detailed info → Standard

Sphingomyelins levels

SNX13 · rs10282707

See detailed info → Standard

Glucose levels

TET2 · rs11728350

See detailed info → Standard

Phospholipids to Total Lipids in Large HDL percentage

ZFPM1 · rs36024491

See detailed info → Standard

Phospholipids in very large HDL

near CSF1 · rs9429767

See detailed info → Standard

Low density lipoprotein cholesterol levels

near APOB · rs1800481

See detailed info → Standard

Total cholesterol levels

CARMIL1 · rs181058325

See detailed info → Standard

High density lipoprotein cholesterol levels

LYPLAL1-AS1 · rs59770119

See detailed info → Standard

Average diameter for VLDL particles

ARNILA · rs11903847

See detailed info → Standard

HDL cholesterol

near BTNL8 · rs188238483

See detailed info → Standard

Triglycerides in HDL

HLMR1 · rs12695769

See detailed info → Standard

HDL cholesterol

VPS11 · rs1177562

See detailed info → Standard

Total cholesterol levels

MITF · rs55921103

See detailed info → Standard

Total cholesterol levels

near GRB7 · rs4795393

See detailed info → Standard

High density lipoprotein cholesterol levels

MGST1 · rs9332891

See detailed info → Standard

Total cholesterol levels

KIF13B · rs117139027

See detailed info → Standard

Total cholesterol levels

near GLTPD2 · rs73339979

See detailed info →

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Questions about variants on this site

What is a "variant" page on this site?

One specific position in the genome (an rsID), explained in plain language with what published research has found it linked to, and how strong that link actually is.

Where does new variant data come from?

The public GWAS Catalog, checked every twenty minutes, plus variants added manually after research review. Every one passes the same quality gate before publishing.

Does being listed here mean a variant causes a condition?

No. Listing reflects an association from published research, not a diagnosis or a cause. Most common variants shift probability modestly rather than determining an outcome.

Can I search this list by gene or rsID?

Yes — the search box above matches gene symbols and rsIDs as well as trait names.