Variants linked to Cholesterol (LDL, HDL and Total)

Continuously updated · newest added Oct 26, 2026

422 positions on this site are linked to Cholesterol (LDL, HDL and Total), out of 131,364 published in total. Each was published only after passing the same quality gate; being on this list is an association, not a diagnosis.

Strength of the evidence: all 2+ 3+ 4

← Back to Cholesterol (LDL, HDL and Total)

Standard

LDL cholesterol

near MTCO3P1 · rs13205804

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Phospholipids to Total Lipids in Small HDL percentage

near MIR4424 · rs1074896

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Average diameter for LDL particles

CMIP · rs56793457

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Cholesterol to Total Lipids in Very Large HDL percentage

near RN7SL140P · rs11693335

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Free Cholesterol to Total Lipids in IDL percentage

near HLA-B · rs34733406

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HDL cholesterol

near HLA-B · rs6908001

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LDL cholesterol

near HLA-DRB5 · rs33997707

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Phospholipids to Total Lipids in Medium HDL percentage

GSTA12P · rs2749024

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Triglycerides in very small VLDL

JMJD1C · rs7909269

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Phospholipids to Total Lipids in Very Large VLDL percentage

near ADRB1 · rs72823016

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Phospholipids to Total Lipids in Small HDL percentage

CHLSN · rs10266519

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Free Cholesterol to Total Lipids in Medium HDL percentage

near RNU4-17P · rs11661876

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LDL cholesterol

RTL9 · rs67648651

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LDL cholesterol

PCSK9 · rs72646508

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Cholesteryl Esters in Small VLDL

MLXIPL · rs34346326

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LDL cholesterol

PCSK9 · rs564427867

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Concentration of HDL particles

APOC3 · rs4225

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Citrate levels

ANKH · rs10065666

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Cholesterol to Total Lipids in Small LDL percentage

near APOB · rs571468

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Phospholipids to Total Lipids in Small HDL percentage

INPP5E · rs13290734

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Showing 20 of 422 · page 1 of 22

Questions about variants on this site

What is a "variant" page on this site?

One specific position in the genome (an rsID), explained in plain language with what published research has found it linked to, and how strong that link actually is.

Where does new variant data come from?

The public GWAS Catalog, checked every twenty minutes, plus variants added manually after research review. Every one passes the same quality gate before publishing.

Does being listed here mean a variant causes a condition?

No. Listing reflects an association from published research, not a diagnosis or a cause. Most common variants shift probability modestly rather than determining an outcome.

Can I search this list by gene or rsID?

Yes — the search box above matches gene symbols and rsIDs as well as trait names.