Standard

HDL cholesterol

near HLA-B · rs6908001

Where this position leads

Condition: Cholesterol (LDL, HDL and Total)

rs6908001 Condition: Cholesterol (LDL, HDL and Total) Cholesterol (LDL, HDL and Total) Condition rs6908001 rs6908001 near HLA-B

What the study found

Who was studied 315,133 European ancestry individuals, 74,970 East Asian ancestry individuals.

The effect Each copy of the C allele shifted the measure 0.0278 lower (95% confidence interval 0.023-0.032); p = 4 × 10−36.

Where it sits Chromosome 6, band 6p21.33 — between genes, 20.3 kb from HLA-B.

What each result means

A/A No copy of the version the research linked to HDL cholesterol. This is the starting point the study compared everyone against.
A/C One copy of the version the research linked to HDL cholesterol. That is a smaller link than two copies.
C/C Two copies of the version the research linked to HDL cholesterol. That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Questions about rs6908001

What is rs6908001?

rs6908001 is a single position in the genome, in or near the near HLA-B gene. Published research associates it with hdl cholesterol. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs6908001 linked to?

On MyGeneLog this position is linked to Cholesterol (LDL, HDL and Total). The research behind each link, and its sources, are set out on that condition page.

Does having rs6908001 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs6908001 come from?

GWAS Catalog, Nature genetics 2021, PMID:34594039. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

HDL cholesterol (rs6908001). MyGeneLog™. https://www.mygenelog.com/variants/rs6908001

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