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Variants linked to Cholesterol (LDL, HDL and Total)

Continuously updated · newest added Nov 8, 2026

1,538 positions on this site are linked to Cholesterol (LDL, HDL and Total), out of 2,506,722 published in total. Each was published only after passing the same quality gate; being on this list is an association, not a diagnosis.

Strength of the evidence: all 2+ 3+ 4 Connections: all only those linked to a condition, drug or sense

← Back to Cholesterol (LDL, HDL and Total)

Standard

Total concentration of branched-chain amino acids (leucine + isoleucine + valine)

CLEC18C · rs370014171

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Standard

Total esterified cholesterol levels

PKN3 · rs13283282

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Degree of unsaturation

near LPL · rs76259755

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Valine levels

intergenic · rs40270

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Cholesteryl Esters to Total Lipids in Very Large HDL percentage

SLC17A3 · rs55925606

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Standard

Free Cholesterol to Total Lipids in Very Large HDL percentage

ERLIN1 · rs2862954

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Free Cholesterol to Total Lipids in Very Large HDL percentage

IRAG1 · rs4910165

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Standard

Total lipids in very large HDL

RSRP1 · rs72660908

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Concentration of very large HDL particles

ACP1 · rs79716074

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Phospholipids to Total Lipids in Very Large HDL percentage

MANEA · rs35772543

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Phospholipids to Total Lipids in Very Large HDL percentage

near ZNF648 · rs61805075

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Phospholipids in very large HDL

FAM47E-STBD1 · rs28507491

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Standard

Triglycerides to Total Lipids in Very Large HDL percentage

SPC25 · rs2140046

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Triglycerides to Total Lipids in Very Large HDL percentage

ZNF655 · rs952319

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Triglycerides to Total Lipids in Very Large HDL percentage

SPATA20 · rs9890200

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Cholesterol levels in very small VLDL

HLA-DQB1 · rs6689

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Cholesterol esters in very small VLDL

GALNT2 · rs11122449

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Free Cholesterol to Total Lipids in Very Small VLDL percentage

PITX3 · rs140312320

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Concentration of very small VLDL particles

ST3GAL4 · rs73632737

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Standard

Phospholipids to Total Lipids in Very Small VLDL percentage

ABCA1 · rs13284054

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Questions about variants on this site

What is a "variant" page on this site?

One specific position in the genome (an rsID), explained in plain language with what published research has found it linked to, and how strong that link actually is.

Where does new variant data come from?

The public GWAS Catalog, checked every twenty minutes, plus variants added manually after research review. Every one passes the same quality gate before publishing.

Does being listed here mean a variant causes a condition?

No. Listing reflects an association from published research, not a diagnosis or a cause. Most common variants shift probability modestly rather than determining an outcome.

Can I search this list by gene or rsID?

Yes — the search box above matches gene symbols and rsIDs as well as trait names.