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Variants linked to Cholesterol (LDL, HDL and Total)

Continuously updated · newest added Nov 8, 2026

1,538 positions on this site are linked to Cholesterol (LDL, HDL and Total), out of 2,506,722 published in total. Each was published only after passing the same quality gate; being on this list is an association, not a diagnosis.

Strength of the evidence: all 2+ 3+ 4 Connections: all only those linked to a condition, drug or sense

← Back to Cholesterol (LDL, HDL and Total)

Standard

Phospholipids to Total Lipids in Very Large HDL percentage

near IKBKE-AS1 · rs7418638

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Standard

Free Cholesterol to Total Lipids in Very Large HDL percentage

NCOA2 · rs71517442

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Total cholesterol levels

near AMD1P4 · rs4713979

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HDL cholesterol

SPIC · rs2373459

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Cholesteryl Esters to Total Lipids in Small VLDL percentage

PDAP1 · rs28753399

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Phospholipids in small HDL

PCBP1-AS1 · rs1987094

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Standard

Triglycerides to Total Lipids in Small HDL percentage

near PCDHGC3 · rs13159206

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Cholesterol in Small HDL

SLC25A31 · rs3816588

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Total cholesterol levels

near UGT2B28 · rs183970949

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Total cholesterol levels

ELL · rs10423802

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Total cholesterol levels

PPP6R2 · rs7410608

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Free Cholesterol to Total Lipids in Large VLDL percentage

near FZD9 · rs42122

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Cholesterol to Total Lipids in Small HDL percentage

MIA2 · rs35530272

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Phospholipids to Total Lipids in Small HDL percentage

ZNF800 · rs17862363

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LDL cholesterol

DIP2B · rs1521516

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High density lipoprotein cholesterol levels

near APOB · rs12992267

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Total cholesterol levels

near ALKBH5 · rs111589301

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Phospholipids to Total Lipids in Large LDL percentage

LINC02935 · rs7902032

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Phospholipids in small HDL

FAF1 · rs72898961

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Free Cholesterol to Total Lipids in Medium VLDL percentage

near MTCH2 · rs12419507

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Questions about variants on this site

What is a "variant" page on this site?

One specific position in the genome (an rsID), explained in plain language with what published research has found it linked to, and how strong that link actually is.

Where does new variant data come from?

The public GWAS Catalog, checked every twenty minutes, plus variants added manually after research review. Every one passes the same quality gate before publishing.

Does being listed here mean a variant causes a condition?

No. Listing reflects an association from published research, not a diagnosis or a cause. Most common variants shift probability modestly rather than determining an outcome.

Can I search this list by gene or rsID?

Yes — the search box above matches gene symbols and rsIDs as well as trait names.