Standard

Free Cholesterol to Total Lipids in Very Large HDL percentage

NCOA2 · rs71517442

Where this position leads

Condition: Cholesterol (LDL, HDL and Total)

rs71517442 Condition: Cholesterol (LDL, HDL and Total) Cholesterol (LDL, HDL and Total) Condition rs71517442 rs71517442 NCOA2

What the study found

Who was studied 434,646 British ancestry individuals, 8,796 British Central/South Asian individuals, 6,573 British African individuals.

The effect Each copy of the A allele shifted the measure 0.02 % higher (95% confidence interval 0.02-0.02); p = 9 × 10−12.

Where it sits Chromosome 8, band 8q13.3 — in an intron of NCOA2.

What each result means

A/A Two copies of the version the research linked to Free Cholesterol to Total Lipids in Very Large HDL percentage. That is the strongest link of the three results. A link in a study is not a diagnosis.
A/G One copy of the version the research linked to Free Cholesterol to Total Lipids in Very Large HDL percentage. That is a smaller link than two copies.
G/G No copy of the version the research linked to Free Cholesterol to Total Lipids in Very Large HDL percentage. This is the starting point the study compared everyone against.
Source

Questions about rs71517442

What is rs71517442?

rs71517442 is a single position in the genome, in or near the NCOA2 gene. Published research associates it with free cholesterol to total lipids in very large hdl percentage. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs71517442 linked to?

On MyGeneLog this position is linked to Cholesterol (LDL, HDL and Total). The research behind each link, and its sources, are set out on that condition page.

Does having rs71517442 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs71517442 come from?

GWAS Catalog, Nature genetics 2025, PMID:41044249. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

Free Cholesterol to Total Lipids in Very Large HDL percentage (rs71517442). MyGeneLog™. https://www.mygenelog.com/variants/rs71517442

← See all variants