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Variants linked to Cholesterol (LDL, HDL and Total)

Continuously updated · newest added Nov 9, 2026

1,538 positions on this site are linked to Cholesterol (LDL, HDL and Total), out of 2,507,630 published in total. Each was published only after passing the same quality gate; being on this list is an association, not a diagnosis.

Strength of the evidence: all 2+ 3+ 4 Connections: all only those linked to a condition, drug or sense

← Back to Cholesterol (LDL, HDL and Total)

Standard

HDL cholesterol

VPS4A · rs16958751

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Standard

Total cholesterol levels

near YTHDF2P1 · rs11626768

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Standard

Cholesteryl Esters in Small HDL

CREB3L1 · rs7113904

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Low density lipoprotein cholesterol levels

near LINC01739 · rs566523636

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Standard

Total cholesterol levels

near SSH1 · rs4964275

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Standard

Free Cholesterol to Total Lipids in IDL percentage

FAM210A · rs180690452

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Standard

Omega-3 fatty acids levels

ETV5 · rs1516726

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Standard

LDL cholesterol

near DENND4C · rs13288021

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Standard

Phospholipids in small HDL

RABGAP1L · rs12087441

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Cholesteryl esters in very large VLDL

near CEP112 · rs9906319

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High density lipoprotein cholesterol levels

near NSD1 · rs6882591

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Standard

HDL cholesterol

ABCA1 · rs4149268

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Standard

HDL cholesterol

MBNL1 · rs3773910

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Standard

Phospholipids in small HDL

near CHCHD7 · rs35205529

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Standard

Low density lipoprotein cholesterol levels

KLHL29 · rs34964606

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Standard

Total lipids in small HDL

GGA3 · rs199641812

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Total cholesterol levels

SEC14L2 · rs187499596

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Standard

Total lipids in large HDL

near Y_RNA · rs1817649

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Standard

HDL cholesterol

LINC01122 · rs17615494

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Standard

High density lipoprotein cholesterol levels

near RPL19P16 · rs12415055

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Questions about variants on this site

What is a "variant" page on this site?

One specific position in the genome (an rsID), explained in plain language with what published research has found it linked to, and how strong that link actually is.

Where does new variant data come from?

The public GWAS Catalog, checked every twenty minutes, plus variants added manually after research review. Every one passes the same quality gate before publishing.

Does being listed here mean a variant causes a condition?

No. Listing reflects an association from published research, not a diagnosis or a cause. Most common variants shift probability modestly rather than determining an outcome.

Can I search this list by gene or rsID?

Yes — the search box above matches gene symbols and rsIDs as well as trait names.