Variants linked to Breast Cancer

Continuously updated · newest added Oct 22, 2026

233 positions on this site are linked to Breast Cancer, out of 108,158 published in total. Each was published only after passing the same quality gate; being on this list is an association, not a diagnosis.

← Back to Breast Cancer

Sensitive

Breast cancer

PKN2-AS1 · rs17426269

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Sensitive

Breast cancer

near LINC01101 · rs117515012

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Sensitive

Breast cancer

ARHGEF38 · rs61751053

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Sensitive

Breast cancer

CUX2 · rs11065822

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Sensitive

Uterine leiomyoma or breast cancer (pleiotropy)

MLLT10 · rs12217370

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Sensitive

Breast cancer

ESRRG · rs11117758

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Sensitive

Breast cancer

LINC01426 · rs12483725

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Sensitive

Uterine leiomyoma or ER negative breast cancer (pleiotropy)

TNRC6B · rs9611271

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Sensitive

Breast cancer

near LINC02379 · rs77528541

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Sensitive

Breast cancer

NREP · rs6882649

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Sensitive

Breast cancer

GRHL1 · rs113577745

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Sensitive

Breast cancer

CMSS1 · rs9833888

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Sensitive

Postmenopausal breast cancer

CCDC170 · rs6929137

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Sensitive

Breast cancer

near VDAC2P3 · rs7529522

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Sensitive

Breast cancer

near LINC02181 · rs4496150

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Sensitive

Uterine leiomyoma or ER positive breast cancer (pleiotropy)

ESR1 · rs851982

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Sensitive

Overall survival in breast cancer treated with Par-4 dependent chemotherapy

near UACA · rs720251

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Sensitive

Breast cancer

near UBA52P7 · rs725677

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Sensitive

Chronotype and breast cancer

near Y_RNA · rs1242507

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Sensitive

Breast cancer

GAREM1 · rs117618124

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Showing 20 of 233 · page 7 of 12

Questions about variants on this site

What is a "variant" page on this site?

One specific position in the genome (an rsID), explained in plain language with what published research has found it linked to, and how strong that link actually is.

Where does new variant data come from?

The public GWAS Catalog, checked every twenty minutes, plus variants added manually after research review. Every one passes the same quality gate before publishing.

Does being listed here mean a variant causes a condition?

No. Listing reflects an association from published research, not a diagnosis or a cause. Most common variants shift probability modestly rather than determining an outcome.

Can I search this list by gene or rsID?

Yes — the search box above matches gene symbols and rsIDs as well as trait names.