Variants linked to Systemic Lupus Erythematosus

Continuously updated · newest added Oct 23, 2026

714 positions on this site are linked to Systemic Lupus Erythematosus, out of 111,813 published in total. Each was published only after passing the same quality gate; being on this list is an association, not a diagnosis.

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Sensitive

Systemic lupus erythematosus

MTF1 · rs3748682

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Sensitive

Systemic lupus erythematosus

MGAT5 · rs33928790

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Sensitive

Systemic lupus erythematosus

IL18RAP · rs11123927

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Sensitive

Systemic lupus erythematosus

near HLA-DRB1 · rs57172910

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Sensitive

Systemic lupus erythematosus

near NCR3 · rs4713476

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Sensitive

Systemic lupus erythematosus (MTAG)

near PTPRC · rs16843471

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Sensitive

Systemic lupus erythematosus (MTAG)

IQCJ-SCHIP1 · rs6441275

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Sensitive

Systemic lupus erythematosus

near HLA-DMB · rs449073

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Sensitive

Systemic lupus erythematosus

near HLA-DRB1 · rs28724228

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Sensitive

Systemic lupus erythematosus

near PRAG1 · rs17594423

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Sensitive

Systemic lupus erythematosus

near HLA-DRA · rs17202787

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Sensitive

Systemic lupus erythematosus (MTAG)

NRG3 · rs12783350

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Sensitive

Systemic lupus erythematosus

IKZF3 · rs111907649

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Sensitive

Systemic lupus erythematosus

POLR1HASP · rs9260809

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Sensitive

Systemic lupus erythematosus (MTAG)

near FASLG · rs7553067

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Sensitive

Systemic lupus erythematosus (PheCode 695.42)

near MIR4458HG · rs73740015

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Sensitive

Systemic lupus erythematosus

STAT4 · rs72913168

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Sensitive

Systemic lupus erythematosus (MTAG)

near GFI1 · rs6662618

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Sensitive

Systemic lupus erythematosus (PheCode 695.42)

DCDC1 · rs569133224

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Sensitive

Systemic lupus erythematosus

IRF5 · rs540618836

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Showing 20 of 714 · page 10 of 36

Questions about variants on this site

What is a "variant" page on this site?

One specific position in the genome (an rsID), explained in plain language with what published research has found it linked to, and how strong that link actually is.

Where does new variant data come from?

The public GWAS Catalog, checked every twenty minutes, plus variants added manually after research review. Every one passes the same quality gate before publishing.

Does being listed here mean a variant causes a condition?

No. Listing reflects an association from published research, not a diagnosis or a cause. Most common variants shift probability modestly rather than determining an outcome.

Can I search this list by gene or rsID?

Yes — the search box above matches gene symbols and rsIDs as well as trait names.