Variants linked to Cleft Lip and Palate

Continuously updated · newest added Oct 25, 2026

11 positions on this site are linked to Cleft Lip and Palate, out of 118,126 published in total. Each was published only after passing the same quality gate; being on this list is an association, not a diagnosis.

← Back to Cleft Lip and Palate

Standard

Cleft lip

CDH4 · rs2427238

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Cleft lip

TP63 · rs79482068

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Orofacial clefts

PAX7 · rs742071

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Orofacial clefts

THADA · rs7590268

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Orofacial clefts

near DCAF4L2 · rs12543318

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Orofacial clefts

IRF6 · rs861020

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Nonsyndromic cleft lip with or without cleft palate

MAFB · rs13041247

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Nonsyndromic cleft lip with or without cleft palate

IRF6 · rs2235371

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Orofacial clefts

SPRY2 · rs8001641

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Orofacial clefts

KIAA1598 · rs7078160

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Orofacial clefts

GSDMC · rs987525

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Questions about variants on this site

What is a "variant" page on this site?

One specific position in the genome (an rsID), explained in plain language with what published research has found it linked to, and how strong that link actually is.

Where does new variant data come from?

The public GWAS Catalog, checked every twenty minutes, plus variants added manually after research review. Every one passes the same quality gate before publishing.

Does being listed here mean a variant causes a condition?

No. Listing reflects an association from published research, not a diagnosis or a cause. Most common variants shift probability modestly rather than determining an outcome.

Can I search this list by gene or rsID?

Yes — the search box above matches gene symbols and rsIDs as well as trait names.