Gene Knowledge Graph
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Variants linked to Cholesterol (LDL, HDL and Total)

Continuously updated · newest added Nov 8, 2026

1,538 positions on this site are linked to Cholesterol (LDL, HDL and Total), out of 2,506,525 published in total. Each was published only after passing the same quality gate; being on this list is an association, not a diagnosis.

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Recommended (connected, strongest) Strongest evidence Newest Oldest

Strength of the evidence: all 2+ 3+ 4 Connections: all only those linked to a condition, drug or sense

← Back to Cholesterol (LDL, HDL and Total)

Standard

High density lipoprotein cholesterol levels

ABCA1 · rs11789603

See detailed info → Standard

High density lipoprotein cholesterol levels

near LPL · rs34770253

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High density lipoprotein cholesterol levels

GIMAP6 · rs62491812

See detailed info → Standard

High density lipoprotein cholesterol levels

SNX13 · rs6461354

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High density lipoprotein cholesterol levels

near HMGA1 · rs76376137

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High density lipoprotein cholesterol levels

SLC39A8 · rs13135092

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High density lipoprotein cholesterol levels

MACF1 · rs72634501

See detailed info → Standard

High density lipoprotein cholesterol levels

FANCB · rs138331350

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High density lipoprotein cholesterol levels

near RGS17 · rs1281955

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High density lipoprotein cholesterol levels

near GSTA3 · rs12529923

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High density lipoprotein cholesterol levels

FCHO2 · rs62362194

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High density lipoprotein cholesterol levels

ETV5 · rs112545201

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LDL cholesterol x physical activity interaction (2df test)

near HNF1A · rs6489786

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LDL cholesterol x physical activity interaction (2df test)

MACO1 · rs12027110

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LDL cholesterol x physical activity interaction (2df test)

TRPS1 · rs2721953

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LDL cholesterol x physical activity interaction (2df test)

MAMSTR · rs4002471

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LDL cholesterol x physical activity interaction (2df test)

near TMED4 · rs217358

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Low density lipoprotein cholesterol levels

HAVCR1 · rs17573010

See detailed info → Standard

High density lipoprotein cholesterol levels

near CETP · rs17369163

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LDL cholesterol x physical activity interaction (2df test)

near DDX18 · rs72834327

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Questions about variants on this site

What is a "variant" page on this site?

One specific position in the genome (an rsID), explained in plain language with what published research has found it linked to, and how strong that link actually is.

Where does new variant data come from?

The public GWAS Catalog, checked every twenty minutes, plus variants added manually after research review. Every one passes the same quality gate before publishing.

Does being listed here mean a variant causes a condition?

No. Listing reflects an association from published research, not a diagnosis or a cause. Most common variants shift probability modestly rather than determining an outcome.

Can I search this list by gene or rsID?

Yes — the search box above matches gene symbols and rsIDs as well as trait names.