Gene Knowledge Graph
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Variants linked to Cholesterol (LDL, HDL and Total)

Continuously updated · newest added Nov 8, 2026

1,538 positions on this site are linked to Cholesterol (LDL, HDL and Total), out of 2,506,722 published in total. Each was published only after passing the same quality gate; being on this list is an association, not a diagnosis.

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Recommended (connected, strongest) Strongest evidence Newest Oldest

Strength of the evidence: all 2+ 3+ 4 Connections: all only those linked to a condition, drug or sense

← Back to Cholesterol (LDL, HDL and Total)

Standard

Free Cholesterol to Total Lipids in Very Large VLDL percentage

ARID4A · rs8005422

See detailed info → Standard

High density lipoprotein cholesterol levels

GFAP · rs72828813

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High density lipoprotein cholesterol levels

near OTUD7B · rs72692849

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Low density lipoprotein cholesterol levels

TRIM59-IFT80 · rs6441313

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Cholesterol to Total Lipids in Small LDL percentage

near RBM25-AS1 · rs61988079

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Cholesterol to Total Lipids in Large VLDL percentage

near CDKN2C · rs57331401

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Free Cholesterol to Total Lipids in Chylomicrons and Extremely Large VLDL percentage

near HLA-DRB9 · rs17209768

See detailed info → Standard

HDL cholesterol

DNAH1 · rs11706108

See detailed info → Standard

High density lipoprotein cholesterol levels

SLC19A3 · rs11694828

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Phospholipids to Total Lipids in Small HDL percentage

LINC01702 · rs12127727

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Phospholipids to Total Lipids in Medium VLDL percentage

ARMH3 · rs118165209

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Total cholesterol levels

C2orf42 · rs2441355

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Total cholesterol levels

SCAF4 · rs112646542

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Omega-3 fatty acids levels

MLLT10 · rs1243179

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High density lipoprotein cholesterol levels

SKAP1 · rs115271198

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Phospholipids to Total Lipids in Small VLDL percentage

near MC4R · rs73455657

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Cholesteryl Esters to Total Lipids in Medium VLDL percentage

RRAS2 · rs74749286

See detailed info → Standard

High density lipoprotein cholesterol levels

SEC14L4 · rs9608956

See detailed info → Standard

Low density lipoprotein cholesterol levels

near C17orf58 · rs78186330

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Cholesteryl Esters to Total Lipids in Large HDL percentage

near CRYAB · rs6589252

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Questions about variants on this site

What is a "variant" page on this site?

One specific position in the genome (an rsID), explained in plain language with what published research has found it linked to, and how strong that link actually is.

Where does new variant data come from?

The public GWAS Catalog, checked every twenty minutes, plus variants added manually after research review. Every one passes the same quality gate before publishing.

Does being listed here mean a variant causes a condition?

No. Listing reflects an association from published research, not a diagnosis or a cause. Most common variants shift probability modestly rather than determining an outcome.

Can I search this list by gene or rsID?

Yes — the search box above matches gene symbols and rsIDs as well as trait names.