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Variants linked to Cholesterol (LDL, HDL and Total)

Continuously updated · newest added Nov 9, 2026

1,538 positions on this site are linked to Cholesterol (LDL, HDL and Total), out of 2,507,630 published in total. Each was published only after passing the same quality gate; being on this list is an association, not a diagnosis.

Strength of the evidence: all 2+ 3+ 4 Connections: all only those linked to a condition, drug or sense

← Back to Cholesterol (LDL, HDL and Total)

Standard

Cholesteryl Esters to Total Lipids in Very Large VLDL percentage

CALCB · rs113990148

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LDL cholesterol

IFT80 · rs10513551

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Cholesteryl Esters to Total Lipids in Small LDL percentage

near LINC-PINT · rs10245520

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Low density lipoprotein cholesterol levels

near HS1BP3 · rs10183220

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LDL cholesterol

APOB · rs72653060

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Phospholipids in small HDL

ZFP30 · rs16958861

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Total cholesterol levels

near ZMIZ1 · rs1782651

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Cholesterol to Total Lipids in Medium HDL percentage

LINC01169 · rs4776304

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Low density lipoprotein cholesterol levels

MMP26 · rs188513096

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Total cholesterol levels

near RPS3AP50 · rs117047468

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Free Cholesterol to Total Lipids in Very Large HDL percentage

near SH3KBP1 · rs111876644

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High density lipoprotein cholesterol levels

SF3B3 · rs940922629

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Cholesteryl Esters to Total Lipids in IDL percentage

FOXN3 · rs4904549

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Cholesteryl Esters to Total Lipids in Small VLDL percentage

MAP2K2 · rs2890215

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HDL cholesterol

RSPO3 · rs2489629

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Total cholesterol levels

ANGPTL4 · rs2010871

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Phospholipids in small HDL

near PPIF · rs11002939

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Cholesteryl Esters to Total Lipids in Small VLDL percentage

LINC02227 · rs2964481

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Triglycerides to Total Lipids in Very Large HDL percentage

FBXL17 · rs256538

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Total cholesterol levels

near RCOR2 · rs77631946

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Questions about variants on this site

What is a "variant" page on this site?

One specific position in the genome (an rsID), explained in plain language with what published research has found it linked to, and how strong that link actually is.

Where does new variant data come from?

The public GWAS Catalog, checked every twenty minutes, plus variants added manually after research review. Every one passes the same quality gate before publishing.

Does being listed here mean a variant causes a condition?

No. Listing reflects an association from published research, not a diagnosis or a cause. Most common variants shift probability modestly rather than determining an outcome.

Can I search this list by gene or rsID?

Yes — the search box above matches gene symbols and rsIDs as well as trait names.