Variants linked to Cholesterol (LDL, HDL and Total)

Continuously updated · newest added Oct 26, 2026

422 positions on this site are linked to Cholesterol (LDL, HDL and Total), out of 149,364 published in total. Each was published only after passing the same quality gate; being on this list is an association, not a diagnosis.

Strength of the evidence: all 2+ 3+ 4

← Back to Cholesterol (LDL, HDL and Total)

Standard

Cholesteryl Esters in Medium HDL

AKNA · rs10733608

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Standard

Free cholesterol in medium HDL

near NPIPB6 · rs2466826

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Total lipids in medium HDL

near SNTB1 · rs10955991

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Total lipids in medium HDL

COL7A1 · rs115744844

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Total lipids in medium HDL

HSD17B13 · rs13119654

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Total lipids in medium HDL

BMP8A · rs72663503

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Total lipids in medium HDL

COBLL1 · rs75265117

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Concentration of medium HDL particles

APOC3 · rs12721030

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Concentration of medium HDL particles

FRK · rs2351285

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Concentration of medium HDL particles

ETV5 · rs77805826

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Concentration of medium HDL particles

near UBASH3B · rs7937761

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Concentration of medium HDL particles

near TRIM39 · rs3132651

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Phospholipids to Total Lipids in Medium HDL percentage

near USP1 · rs626787

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Phospholipids to Total Lipids in Medium HDL percentage

near LYPLAL1 · rs6671638

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Phospholipids in medium HDL

CHLSN · rs10233430

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Phospholipids in medium HDL

RRBP1 · rs1054787

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Phospholipids in medium HDL

SBF2 · rs57153895

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Phospholipids in medium HDL

TET2 · rs974801

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Triglycerides in medium HDL

NEIL2 · rs904009

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Cholesterol to Total Lipids in Medium LDL percentage

near NFAT5 · rs12599637

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Showing 20 of 422 · page 5 of 22

Questions about variants on this site

What is a "variant" page on this site?

One specific position in the genome (an rsID), explained in plain language with what published research has found it linked to, and how strong that link actually is.

Where does new variant data come from?

The public GWAS Catalog, checked every twenty minutes, plus variants added manually after research review. Every one passes the same quality gate before publishing.

Does being listed here mean a variant causes a condition?

No. Listing reflects an association from published research, not a diagnosis or a cause. Most common variants shift probability modestly rather than determining an outcome.

Can I search this list by gene or rsID?

Yes — the search box above matches gene symbols and rsIDs as well as trait names.