Variants linked to Breast Cancer

Continuously updated · newest added Oct 22, 2026

233 positions on this site are linked to Breast Cancer, out of 108,020 published in total. Each was published only after passing the same quality gate; being on this list is an association, not a diagnosis.

← Back to Breast Cancer

Sensitive

Breast cancer

UBA52P7 · rs10744856

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Sensitive

Postmenopausal breast cancer

near SEMA6B · rs73920866

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Sensitive

Chronotype and breast cancer

ST6GAL1 · rs34406259

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Sensitive

Breast cancer

PAX9 · rs12885612

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Sensitive

Breast cancer

near RPS27P11 · rs56138756

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Sensitive

Chronotype and breast cancer

near PHC2 · rs55860530

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Sensitive

Breast cancer

near CDYLP1 · rs1375631

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Sensitive

Breast cancer

CDKN2B-AS1 · rs974336

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Sensitive

Breast cancer

near PPIAP39 · rs58742730

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Sensitive

Breast cancer

near OR2J3 · rs3129178

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Sensitive

Chronotype and ER- breast cancer

TNRC6B · rs3091342

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Sensitive

Breast cancer

AQP4-AS1 · rs232320

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Sensitive

Uterine leiomyoma or ER negative breast cancer (pleiotropy)

near DDX10 · rs188691509

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Sensitive

Breast cancer

SUB1 · rs12519859

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Sensitive

Breast cancer, ovarian cancer or prostate cancer (pleiotropy)

near RIN1 · rs118151305

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Sensitive

Breast cancer

CNTNAP1 · rs72826962

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Sensitive

Breast cancer

XPNPEP3 · rs62237039

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Sensitive

Breast cancer

near RN7SKP167 · rs9421409

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Sensitive

Uterine leiomyoma or breast cancer (pleiotropy)

GNAO1 · rs3790110

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Sensitive

Breast cancer subtype (triple negative vs luminal A-like)

ANO8 · rs3745191

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Showing 20 of 233 · page 1 of 12

Questions about variants on this site

What is a "variant" page on this site?

One specific position in the genome (an rsID), explained in plain language with what published research has found it linked to, and how strong that link actually is.

Where does new variant data come from?

The public GWAS Catalog, checked every twenty minutes, plus variants added manually after research review. Every one passes the same quality gate before publishing.

Does being listed here mean a variant causes a condition?

No. Listing reflects an association from published research, not a diagnosis or a cause. Most common variants shift probability modestly rather than determining an outcome.

Can I search this list by gene or rsID?

Yes — the search box above matches gene symbols and rsIDs as well as trait names.