Metabolic

Hypo-HDL-Cholesterolemia

Reviewed September 28, 2026

Abnormally low "good" cholesterol, studied across sex and life stage in over 50,000 Korean adults — the study’s real finding was that menopause, not age, is what turns up the genetic risk.

What this condition connects to

Hypo-HDL-Cholesterolemia Variant: rs17410996 rs17410996 Variant Variant: rs75326924 rs75326924 Variant Variant: rs6467314 rs6467314 Variant Variant: rs4821130 rs4821130 Variant Variant: rs10422861 rs10422861 Variant Variant: +4 more +4 more Variant Hypo-HDL-Cholesterolemia Hypo-HDL- Cholesterol… Metabolic
Prevalence
This study drew its findings from 50,808 Korean adults in the Korean Genome and Epidemiology Study (KoGES) cohort, analyzed separately by sex and by life stage (young adult, peri-menopausal, older adult).
Inheritance
Six variant associations for hypo-HDL-cholesterolemia, one of eight metabolic phenotypes examined together in a 2022 Korean lifecourse GWAS that found 101 significant loci in total across all eight.

Hypo-HDL-cholesterolemia is abnormally low HDL ("good") cholesterol, one of several metabolic disorders studied together in the research behind this page.

A genetics study built around sex and life stage, not just diagnosis

A 2022 study using the Korean Genome and Epidemiology Study (KoGES) cohort ran genome-wide association analyses in 50,808 Korean adults — the first study of its kind to analyze genetic risk factors for metabolic disorders separately by both sex and life stage (young adult, peri-menopausal, and older adult groups), rather than treating age as a single continuous variable. It examined eight metabolic phenotypes together: general obesity, abdominal obesity, hypertension, type 2 diabetes, hypercholesterolemia, hypertriglyceridemia, hypo-HDL-cholesterolemia, and metabolic syndrome.

Across all eight phenotypes, the study found 101 significant loci, 15 of them newly reported. Six of the loci tied to hypo-HDL-cholesterolemia specifically are catalogued here: rs17410996 (near LPL), rs75326924 (CD36), rs6467314 (near KLF14), rs4821130 (near YDJC), rs10422861 (PEPD), and rs2494746 (AKT1). The abstract does not break the 101-locus or 15-newly-reported totals down by which of the eight phenotypes each belongs to, so this page makes no such claim for these six specifically.

The study's actual headline finding: menopause, not age

The study's central conclusion was that menopausal transition, rather than aging itself, potentiates the influence of genetic risk on metabolic disorders — some genetic loci showed associations specific to peri-menopausal women that did not appear in younger women or in men of the same age. Several low-frequency genetic variants were found to play a role in metabolic disturbances only within a specific sex-and-age group, rather than across the population generally.

Clinical detail

What is actually diagnosed and treated here

Hypo-HDL-cholesterolemia is diagnosed by a blood lipid panel, not by genotype. These six variants are research associations from a Korean population study, not a diagnostic test, and this study’s Korean cohort may not generalize directly to other populations.

The study's sex-and-life-stage framing is itself a clinical finding worth knowing: it suggests that for at least some metabolic disorders, when in a person's life genetic risk actually shows up may depend on menopausal status rather than calendar age alone — though this remains a population-level research finding, not something used to guide individual screening or treatment today.

Related variants MyGeneLog™ checks for

What a 23andMe/AncestryDNA export or raw VCF can and can't tell you about Hypo-HDL-Cholesterolemia comes down to these specific, well-studied positions — not a diagnosis.

Standard

Hypo-HDL-cholesterolemia

near LPL · rs17410996

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Standard

Hypo-HDL-cholesterolemia

CD36 · rs75326924

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Standard

Hypo-HDL-cholesterolemia

near KLF14 · rs6467314

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Standard

Hypo-HDL-cholesterolemia

near YDJC · rs4821130

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Standard

Hypo-HDL-cholesterolemia

PEPD · rs10422861

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Standard

Hypo-HDL-cholesterolemia

AKT1 · rs2494746

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Standard

Hypercholesterolemia

HMGCR · rs17244834

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Standard

Hypercholesterolemia

TOMM40 · rs111784051

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Standard

Hypercholesterolemia

near CYP7A1 · rs75214121

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Sources

Databases, guidelines and references

Papers, with their authors

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

Hypo-HDL-Cholesterolemia. MyGeneLog™. https://www.mygenelog.com/conditions/hypo-hdl-cholesterolemia

Questions about Hypo-HDL-Cholesterolemia

What is hypo-HDL-cholesterolemia?

Hypo-HDL-cholesterolemia is abnormally low HDL ("good") cholesterol, one of eight metabolic phenotypes studied together in the Korean research behind this page.

Does menopause affect the genetic risk for metabolic disorders?

According to this study, yes — its central finding was that menopausal transition, not aging itself, potentiates how much genetic risk factors influence metabolic disorders in women.

Were these variants found in a Korean population specifically?

Yes. The study behind this page used the Korean Genome and Epidemiology Study (KoGES) cohort, 50,808 Korean adults — findings from one population do not always transfer to others.

Free to reuse. This page's text is original writing from freely-available research, licensed CC BY 4.0 — reuse it, including commercially, with attribution to MyGeneLog™. It's general research-derived information, not medical advice or a diagnosis — see Terms of Use.