Gene Knowledge Graph
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Variants linked to Cholesterol (LDL, HDL and Total)

Continuously updated · newest added Nov 9, 2026

1,540 positions on this site are linked to Cholesterol (LDL, HDL and Total), out of 2,508,158 published in total. Each was published only after passing the same quality gate; being on this list is an association, not a diagnosis.

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Recommended (connected, strongest) Strongest evidence Newest Oldest

Strength of the evidence: all 2+ 3+ 4 Connections: all only those linked to a condition, drug or sense

← Back to Cholesterol (LDL, HDL and Total)

Standard

HDL cholesterol x physical activity interaction (2df test)

DDB2 · rs326222

See detailed info → Standard

Low density lipoprotein cholesterol levels

APOC4-APOC2 · rs12721109

See detailed info → Standard

Low density lipoprotein cholesterol levels

near BCL3 · rs1531517

See detailed info → Standard

Low density lipoprotein cholesterol levels

near BCL3 · rs2927439

See detailed info → Standard

Total cholesterol levels

NECTIN2 · rs395908

See detailed info → Standard

Low density lipoprotein cholesterol levels

near NPC1L1 · rs2073547

See detailed info → Standard

Total cholesterol levels

SMARCA4 · rs73015011

See detailed info → Standard

Low density lipoprotein cholesterol levels

near APOB · rs541041

See detailed info → Standard

Low density lipoprotein cholesterol levels

ABCG8 · rs76866386

See detailed info → Standard

Low density lipoprotein cholesterol levels

near APOB · rs568938

See detailed info → Standard

Low density lipoprotein cholesterol levels

SERPINA1 · rs17580

See detailed info → Standard

Total cholesterol levels

PCSK9 · rs151193009

See detailed info → Standard

High density lipoprotein cholesterol levels

CETP · rs5883

See detailed info → Standard

High density lipoprotein cholesterol levels

CETP · rs12720922

See detailed info → Standard

High density lipoprotein cholesterol levels

CETP · rs11076174

See detailed info → Standard

High density lipoprotein cholesterol levels

APOC1 · rs66626994

See detailed info → Standard

High density lipoprotein cholesterol levels

near HERPUD1 · rs56156922

See detailed info → Standard

High density lipoprotein cholesterol levels

RRN3 · rs11644601

See detailed info → Standard

High density lipoprotein cholesterol levels

ALDH1A2 · rs7350789

See detailed info → Standard

High density lipoprotein cholesterol levels

near BUD13 · rs2367970

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Questions about variants on this site

What is a "variant" page on this site?

One specific position in the genome (an rsID), explained in plain language with what published research has found it linked to, and how strong that link actually is.

Where does new variant data come from?

The public GWAS Catalog, checked every twenty minutes, plus variants added manually after research review. Every one passes the same quality gate before publishing.

Does being listed here mean a variant causes a condition?

No. Listing reflects an association from published research, not a diagnosis or a cause. Most common variants shift probability modestly rather than determining an outcome.

Can I search this list by gene or rsID?

Yes — the search box above matches gene symbols and rsIDs as well as trait names.