Variants linked to Cholesterol (LDL, HDL and Total)

Continuously updated · newest added Oct 25, 2026

1,155 positions on this site are linked to Cholesterol (LDL, HDL and Total), out of 118,864 published in total. Each was published only after passing the same quality gate; being on this list is an association, not a diagnosis.

← Back to Cholesterol (LDL, HDL and Total)

Standard

High density lipoprotein cholesterol levels

MLXIPL · rs13240994

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Standard

High density lipoprotein cholesterol levels

near HMGA1 · rs76376137

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High density lipoprotein cholesterol levels

near CITED2 · rs672457

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High density lipoprotein cholesterol levels

near CITED2 · rs17585887

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Standard

High density lipoprotein cholesterol levels

near COBLL1 · rs10184004

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Standard

High density lipoprotein cholesterol levels

near PRKAG3 · rs78058190

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High density lipoprotein cholesterol levels

SLC39A8 · rs13135092

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Standard

High density lipoprotein cholesterol levels

near APOB · rs4665710

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Standard

High density lipoprotein cholesterol levels

near APOB · rs13392272

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High density lipoprotein cholesterol levels

GALNT2 · rs1321257

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High density lipoprotein cholesterol levels

APOB · rs533617

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High density lipoprotein cholesterol levels

FANCB · rs138331350

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High density lipoprotein cholesterol levels

near ARID1A · rs193084249

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High density lipoprotein cholesterol levels

MACF1 · rs72634501

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High density lipoprotein cholesterol levels

FCHO2 · rs62362194

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High density lipoprotein cholesterol levels

near GSTA3 · rs12529923

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High density lipoprotein cholesterol levels

ETV5 · rs112545201

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High density lipoprotein cholesterol levels

near RGS17 · rs1281955

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LDL cholesterol x physical activity interaction (2df test)

TRPS1 · rs2721953

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Standard

LDL cholesterol x physical activity interaction (2df test)

near TOP1 · rs6029549

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Questions about variants on this site

What is a "variant" page on this site?

One specific position in the genome (an rsID), explained in plain language with what published research has found it linked to, and how strong that link actually is.

Where does new variant data come from?

The public GWAS Catalog, checked every twenty minutes, plus variants added manually after research review. Every one passes the same quality gate before publishing.

Does being listed here mean a variant causes a condition?

No. Listing reflects an association from published research, not a diagnosis or a cause. Most common variants shift probability modestly rather than determining an outcome.

Can I search this list by gene or rsID?

Yes — the search box above matches gene symbols and rsIDs as well as trait names.