Gene Knowledge Graph
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Variants linked to Cholesterol (LDL, HDL and Total)

Continuously updated · newest added Nov 8, 2026

1,538 positions on this site are linked to Cholesterol (LDL, HDL and Total), out of 2,506,722 published in total. Each was published only after passing the same quality gate; being on this list is an association, not a diagnosis.

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Recommended (connected, strongest) Strongest evidence Newest Oldest

Strength of the evidence: all 2+ 3+ 4 Connections: all only those linked to a condition, drug or sense

← Back to Cholesterol (LDL, HDL and Total)

Standard

Free Cholesterol to Total Lipids in Large LDL percentage

PCSK9 · rs2479413

See detailed info → Standard

Low density lipoprotein cholesterol levels

JMJD1C · rs10761750

See detailed info → Standard

Triglycerides in large HDL

near DAGLB · rs12702504

See detailed info → Standard

Phospholipids to Total Lipids in Large LDL percentage

SOX7-AS1 · rs73544366

See detailed info → Standard

Phospholipids to Total Lipids in Large LDL percentage

LINC01344 · rs2332969

See detailed info → Standard

Total cholesterol levels

SLC4A8 · rs10876171

See detailed info → Standard

LDL cholesterol

EHBP1 · rs2710644

See detailed info → Standard

Total concentration of branched-chain amino acids (leucine + isoleucine + valine)

ARMC2 · rs1040848

See detailed info → Standard

Cholesteryl Esters to Total Lipids in Large VLDL percentage

INPP5E · rs72775768

See detailed info → Standard

Total cholesterol levels

RPL23A · rs7216105

See detailed info → Standard

Low density lipoprotein cholesterol levels

near LINC01822 · rs191450029

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Total cholesterol levels

near ATOSA · rs72740245

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LDL cholesterol

near ZNF274 · rs117492019

See detailed info → Standard

Total cholesterol levels

SMC6 · rs7556983

See detailed info → Standard

HDL cholesterol

RP11-69G7.1 · rs55703462

See detailed info → Standard

Total cholesterol levels

SLC19A1 · rs77974343

See detailed info → Standard

Total cholesterol levels

LINC00299 · rs67269656

See detailed info → Standard

High density lipoprotein cholesterol levels

RARA · rs2586116

See detailed info → Standard

Low density lipoprotein cholesterol levels

near LINC02923 · rs150520162

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High density lipoprotein cholesterol levels

GAREM1 · rs144242131

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Questions about variants on this site

What is a "variant" page on this site?

One specific position in the genome (an rsID), explained in plain language with what published research has found it linked to, and how strong that link actually is.

Where does new variant data come from?

The public GWAS Catalog, checked every twenty minutes, plus variants added manually after research review. Every one passes the same quality gate before publishing.

Does being listed here mean a variant causes a condition?

No. Listing reflects an association from published research, not a diagnosis or a cause. Most common variants shift probability modestly rather than determining an outcome.

Can I search this list by gene or rsID?

Yes — the search box above matches gene symbols and rsIDs as well as trait names.