Variants linked to Cholesterol (LDL, HDL and Total)

Continuously updated · newest added Oct 26, 2026

422 positions on this site are linked to Cholesterol (LDL, HDL and Total), out of 149,364 published in total. Each was published only after passing the same quality gate; being on this list is an association, not a diagnosis.

Strength of the evidence: all 2+ 3+ 4

← Back to Cholesterol (LDL, HDL and Total)

Standard

Cholesterol to Total Lipids in Large VLDL percentage

JAZF1 · rs849138

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Standard

Cholesteryl Esters to Total Lipids in Large VLDL percentage

GALNT2 · rs10779835

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Standard

Cholesteryl Esters to Total Lipids in Large VLDL percentage

near KLF14 · rs11762784

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Standard

Free Cholesterol to Total Lipids in Large VLDL percentage

PNLIPRP2 · rs2286779

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Standard

Free Cholesterol to Total Lipids in Large VLDL percentage

KCTD10 · rs2338104

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Concentration of large VLDL particles

NRBF2 · rs7073746

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Standard

Phospholipids in large VLDL

near SPC24 · rs11671372

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Triglycerides to Total Lipids in Large VLDL percentage

SEC16A · rs3812591

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Triglycerides to Total Lipids in Large VLDL percentage

HNF1A · rs9738226

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Linoleic acid to total fatty acids percentage

near MOGAT2 · rs531117

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Linoleic acid to total fatty acids percentage

PCCB · rs548288

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Linoleic acid to total fatty acids percentage

PDXDC1 · rs55727637

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Linoleic acid to total fatty acids percentage

near PLG · rs6935921

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Linoleic acid to total fatty acids percentage

near MC4R · rs73455626

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Concentration of LDL particles

CMTM6 · rs17029617

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Average diameter for LDL particles

FAM13A · rs2869948

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Triglycerides in LDL

TRPS1 · rs2737263

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Cholesterol in Medium HDL

near COPB1 · rs61884028

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Cholesteryl Esters to Total Lipids in Medium HDL percentage

near BMP8A · rs72663520

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Standard

Cholesteryl Esters in Medium HDL

MIDEAS · rs10145740

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Showing 20 of 422 · page 4 of 22

Questions about variants on this site

What is a "variant" page on this site?

One specific position in the genome (an rsID), explained in plain language with what published research has found it linked to, and how strong that link actually is.

Where does new variant data come from?

The public GWAS Catalog, checked every twenty minutes, plus variants added manually after research review. Every one passes the same quality gate before publishing.

Does being listed here mean a variant causes a condition?

No. Listing reflects an association from published research, not a diagnosis or a cause. Most common variants shift probability modestly rather than determining an outcome.

Can I search this list by gene or rsID?

Yes — the search box above matches gene symbols and rsIDs as well as trait names.