Variants linked to Celiac Disease

Continuously updated · newest added Oct 22, 2026

20,580 positions on this site are linked to Celiac Disease, out of 108,116 published in total. Each was published only after passing the same quality gate; being on this list is an association, not a diagnosis.

← Back to Celiac Disease

Sensitive

Celiac disease (PheCode 557.1)

LINC01016 · rs190732321

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Sensitive

Celiac disease (PheCode 557.1)

TSBP1-AS1 · rs113857285

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Sensitive

Autoimmune traits (pleiotropy)

IL2RA · rs72776098

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Sensitive

Autoimmune traits (pleiotropy)

PTPN22 · rs1217403

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Sensitive

Takes medication for celiac disease/sprue?

near GPR149 · rs187313455

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Standard

Platelet count (UKB data field 30080)

near RPL6P18 · rs9393356

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Standard

LILRB2 protein levels

LINC00529 · rs920047

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Standard

GRIK2 protein levels

ASCC3 · rs846791

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Standard

PM20D1 protein levels

near MAFB · rs8122610

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Standard

SAT2 protein levels

SHBG · rs80279359

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Standard

Impedance of whole body (UKB data field 23106)

MIR9-3HG · rs8023812

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Standard

CPA4 protein levels

CPA5 · rs79889956

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Standard

NCAN protein levels

THADA · rs78481334

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Standard

GGH protein levels

near TARDBPP4 · rs77665153

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Standard

CCL14 protein levels

MED12L · rs77277933

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Standard

PAMR1 protein levels

near LINC00620 · rs76085500

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Standard

KLRD1 protein levels

near CLEC1A · rs73054683

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Standard

PDE5A protein levels

near LINC01365 · rs72684511

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Standard

NOTCH3 protein levels

near GIMAP4 · rs6960073

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Standard

POMC protein levels

near HNRNPKP2 · rs6707042

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Questions about variants on this site

What is a "variant" page on this site?

One specific position in the genome (an rsID), explained in plain language with what published research has found it linked to, and how strong that link actually is.

Where does new variant data come from?

The public GWAS Catalog, checked every twenty minutes, plus variants added manually after research review. Every one passes the same quality gate before publishing.

Does being listed here mean a variant causes a condition?

No. Listing reflects an association from published research, not a diagnosis or a cause. Most common variants shift probability modestly rather than determining an outcome.

Can I search this list by gene or rsID?

Yes — the search box above matches gene symbols and rsIDs as well as trait names.