Standard

HDL cholesterol levels

HLA-B · rs6902116

Where this position leads

Drugs: Abacavir, Allopurinol, Carbamazepine and oxcarbazepine

rs6902116 Drug: Abacavir Abacavir Drug Drug: Allopurinol Allopurinol Drug Drug: Carbamazepine and oxcarbazepine Carbamazepine and oxcarbazepine Drug rs6902116 rs6902116 HLA-B

What the study found

Who was studied 403,943 European ancestry individuals.

The effect Each copy of the A allele shifted the measure 0.0274 higher (95% confidence interval 0.023-0.031); p = 2 × 10−40.

How common The A allele had a frequency of about 68% in the people studied.

Where it sits Chromosome 6, band 6p21.33 — between genes, 21.4 kb from HLA-B.

What each result means

A/A Two copies of the version the research linked to HDL cholesterol levels. That is the strongest link of the three results. A link in a study is not a diagnosis.
A/G One copy of the version the research linked to HDL cholesterol levels. That is a smaller link than two copies.
G/G No copy of the version the research linked to HDL cholesterol levels. This is the starting point the study compared everyone against.
Source

Questions about rs6902116

What is rs6902116?

rs6902116 is a single position in the genome, in or near the HLA-B gene. Published research associates it with hdl cholesterol levels. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

Does rs6902116 affect how medicines work?

HLA-B carries pharmacogenomic findings for Abacavir, Allopurinol, Carbamazepine and oxcarbazepine. That is educational information, not a prescription or a dosing guide. Any decision to start, stop or change a medicine belongs with the clinician or pharmacist managing your treatment.

Does having rs6902116 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs6902116 come from?

GWAS Catalog, PLoS medicine 2020, PMID:32203549. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

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HDL cholesterol levels (rs6902116). MyGeneLog™. https://www.mygenelog.com/variants/rs6902116

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