Standard

SEZ6L2 protein levels

HLA-B · rs2523567

Where this position leads

Condition: Celiac Disease

Drugs: Abacavir, Allopurinol, Carbamazepine and oxcarbazepine

rs2523567 Condition: Celiac Disease Celiac Disease Condition Drug: Abacavir Abacavir Drug Drug: Allopurinol Allopurinol Drug Drug: Carbamazepine and oxcarbazepine Carbamazepine and oxcarbazepine Drug rs2523567 rs2523567 HLA-B

What the study found

Who was studied 47,745 European ancestry individuals.

The effect Each copy of the G allele shifted the measure 0.0577 lower (95% confidence interval 0.046-0.07); p = 4 × 10−25.

How common The G allele had a frequency of about 23% in the people studied.

Where it sits Chromosome 6, band 6p21.33 — in a non-coding transcript of HLA-B.

What each result means

C/C No copy of the version the research linked to SEZ6L2 protein levels. This is the starting point the study compared everyone against.
C/G One copy of the version the research linked to SEZ6L2 protein levels. That is a smaller link than two copies.
G/G Two copies of the version the research linked to SEZ6L2 protein levels. That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Questions about rs2523567

What is rs2523567?

rs2523567 is a single position in the genome, in or near the HLA-B gene. Published research associates it with sez6l2 protein levels. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs2523567 linked to?

On MyGeneLog this position is linked to Celiac Disease. The research behind each link, and its sources, are set out on that condition page.

Does rs2523567 affect how medicines work?

HLA-B carries pharmacogenomic findings for Abacavir, Allopurinol, Carbamazepine and oxcarbazepine. That is educational information, not a prescription or a dosing guide. Any decision to start, stop or change a medicine belongs with the clinician or pharmacist managing your treatment.

Does having rs2523567 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs2523567 come from?

GWAS Catalog, Nature genetics 2025, PMID:39789286. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

SEZ6L2 protein levels (rs2523567). MyGeneLog™. https://www.mygenelog.com/variants/rs2523567

← See all variants