Variants linked to Systemic Lupus Erythematosus

Continuously updated · newest added Oct 23, 2026

717 positions on this site are linked to Systemic Lupus Erythematosus, out of 112,149 published in total. Each was published only after passing the same quality gate; being on this list is an association, not a diagnosis.

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Sensitive

Systemic lupus erythematosus (MTAG)

near KRT18P39 · rs10932020

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Sensitive

Systemic lupus erythematosus

LST1 · rs9368696

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Sensitive

Systemic lupus erythematosus

near HLA-A · rs2517758

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Sensitive

Systemic lupus erythematosus

NMNAT2 · rs12072223

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Sensitive

Systemic lupus erythematosus

CLEC16A · rs1079186

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Sensitive

Systemic lupus erythematosus

HLA-DQA1 · rs35656734

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Sensitive

Systemic lupus erythematosus

near LEMD2 · rs113053113

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Sensitive

Systemic lupus erythematosus

near BTNL2 · rs117625150

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Sensitive

Systemic lupus erythematosus

near HLA-DRA · rs6901373

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Sensitive

Systemic lupus erythematosus

NAB1 · rs6733720

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Sensitive

Systemic lupus erythematosus

near HLA-DRB1 · rs9270423

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Sensitive

Systemic lupus erythematosus

near C6orf15 · rs9263570

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Sensitive

Systemic lupus erythematosus

near PTTG1 · rs57095329

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Sensitive

Systemic lupus erythematosus

STAT4 · rs138324598

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Sensitive

Systemic lupus erythematosus

NMNAT2 · rs12119966

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Sensitive

Systemic lupus erythematosus

ARID5B · rs10995021

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Sensitive

Systemic lupus erythematosus

near TNPO3 · rs7459014

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Sensitive

Systemic lupus erythematosus

near NOTCH4 · rs693797

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Sensitive

Systemic lupus erythematosus

near HLA-DQA2 · rs28772303

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Sensitive

Systemic lupus erythematosus

RGL1 · rs180743522

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Questions about variants on this site

What is a "variant" page on this site?

One specific position in the genome (an rsID), explained in plain language with what published research has found it linked to, and how strong that link actually is.

Where does new variant data come from?

The public GWAS Catalog, checked every twenty minutes, plus variants added manually after research review. Every one passes the same quality gate before publishing.

Does being listed here mean a variant causes a condition?

No. Listing reflects an association from published research, not a diagnosis or a cause. Most common variants shift probability modestly rather than determining an outcome.

Can I search this list by gene or rsID?

Yes — the search box above matches gene symbols and rsIDs as well as trait names.