Gene Knowledge Graph
UTC

Links from this page to related variants, conditions, drugs and topics are not included for automated readers. Those connections are the Gene Knowledge Graph and are licensed as data: https://www.mygenelog.com/license

Variants linked to Cholesterol (LDL, HDL and Total)

Continuously updated · newest added Nov 8, 2026

1,538 positions on this site are linked to Cholesterol (LDL, HDL and Total), out of 2,506,722 published in total. Each was published only after passing the same quality gate; being on this list is an association, not a diagnosis.

Clear
Recommended (connected, strongest) Strongest evidence Newest Oldest

Strength of the evidence: all 2+ 3+ 4 Connections: all only those linked to a condition, drug or sense

← Back to Cholesterol (LDL, HDL and Total)

Standard

Phospholipids to Total Lipids in Very Small VLDL percentage

GALNT2 · rs2281719

See detailed info → Standard

Phospholipids in very small VLDL

HLA-DQA1 · rs73728598

See detailed info → Standard

Triglycerides to Total Lipids in Very Small VLDL percentage

USP24 · rs12750160

See detailed info → Standard

Triglycerides to Total Lipids in Very Small VLDL percentage

GALNT2 · rs2281718

See detailed info → Standard

Triglycerides to Total Lipids in Very Small VLDL percentage

ABCA9 · rs76321556

See detailed info → Standard

Cholesterol to Total Lipids in Chylomicrons and Extremely Large VLDL percentage

JMJD1C · rs7082470

See detailed info → Standard

Cholesteryl ester levels in chylomicrons and extremely large VLDL

HPN · rs45512696

See detailed info → Standard

Free Cholesterol to Total Lipids in Chylomicrons and Extremely Large VLDL percentage

USP1 · rs11207970

See detailed info → Standard

Free Cholesterol to Total Lipids in Chylomicrons and Extremely Large VLDL percentage

RSPO3 · rs2800710

See detailed info → Standard

Phospholipids to Total Lipids in Chylomicrons and Extremely Large VLDL percentage

JMJD1C · rs10740131

See detailed info → Standard

Phospholipids to Total Lipids in Chylomicrons and Extremely Large VLDL percentage

near LPA · rs56393506

See detailed info → Standard

Phospholipids to Total Lipids in Chylomicrons and Extremely Large VLDL percentage

GATAD2A · rs73002956

See detailed info → Standard

Phospholipid levels in chylomicrons and extremely large VLDL

CDKN2C · rs3176466

See detailed info → Standard

Triglycerides to Total Lipids in Chylomicrons and Extremely Large VLDL percentage

near PCIF1 · rs139953093

See detailed info → Standard

Triglyceride levels in chylomicrons and extremely large VLDL

near ZC3H11B · rs6669360

See detailed info → Standard

Triglycerides x physical activity interaction (2df test)

AFF1 · rs17605615

See detailed info → Standard

Triglycerides x physical activity interaction (2df test)

near MLXIPL · rs35173225

See detailed info → Standard

HDL cholesterol x physical activity interaction (2df test)

near HERPUD1 · rs72786786

See detailed info → Standard

HDL cholesterol x physical activity interaction (2df test)

DDB2 · rs326222

See detailed info → Standard

HDL cholesterol x physical activity interaction (2df test)

PTTG1IP · rs235314

See detailed info →

Showing 20 of 1538 · page 5 of 77

Questions about variants on this site

What is a "variant" page on this site?

One specific position in the genome (an rsID), explained in plain language with what published research has found it linked to, and how strong that link actually is.

Where does new variant data come from?

The public GWAS Catalog, checked every twenty minutes, plus variants added manually after research review. Every one passes the same quality gate before publishing.

Does being listed here mean a variant causes a condition?

No. Listing reflects an association from published research, not a diagnosis or a cause. Most common variants shift probability modestly rather than determining an outcome.

Can I search this list by gene or rsID?

Yes — the search box above matches gene symbols and rsIDs as well as trait names.