Gene Knowledge Graph
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Variants linked to Cholesterol (LDL, HDL and Total)

Continuously updated · newest added Nov 9, 2026

1,540 positions on this site are linked to Cholesterol (LDL, HDL and Total), out of 2,507,836 published in total. Each was published only after passing the same quality gate; being on this list is an association, not a diagnosis.

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Recommended (connected, strongest) Strongest evidence Newest Oldest

Strength of the evidence: all 2+ 3+ 4 Connections: all only those linked to a condition, drug or sense

← Back to Cholesterol (LDL, HDL and Total)

Standard

LDL cholesterol

PCSK9 · rs2479409

See detailed info → Standard

HDL cholesterol

CITED2 · rs605066

See detailed info → Standard

HDL cholesterol

SBNO1 · rs4759375

See detailed info → Standard

High density lipoprotein cholesterol levels

near LEKR1 · rs900399

See detailed info → Standard

HDL cholesterol

GALNT2 · rs4846914

See detailed info → Standard

HDL cholesterol

GSK3B · rs6805251

See detailed info → Standard

HDL cholesterol

near RNU6-334P · rs325481

See detailed info → Standard

HDL cholesterol

HIVEP2 · rs62428831

See detailed info → Standard

HDL cholesterol

RBM6 · rs111439884

See detailed info → Standard

LDL cholesterol

ABCB11 · rs12989783

See detailed info → Standard

HDL cholesterol

ZBTB42 · rs4983559

See detailed info → Standard

Total cholesterol levels

near COX6A1 · rs2516079

See detailed info → Standard

Total cholesterol levels

HDGFL2 · rs34054295

See detailed info → Standard

Total cholesterol levels

TULP1 · rs11754612

See detailed info → Standard

HDL cholesterol

FAM13A · rs13133548

See detailed info → Standard

HDL cholesterol

SCARB1 · rs838886

See detailed info → Standard

Low density lipoprotein cholesterol levels

CARMIL1 · rs116272812

See detailed info → Standard

LDL cholesterol

MAFB · rs2902940

See detailed info → Standard

High density lipoprotein cholesterol levels

TRANK1 · rs11706926

See detailed info → Standard

Low density lipoprotein cholesterol levels

APPL2 · rs1196760

See detailed info →

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Questions about variants on this site

What is a "variant" page on this site?

One specific position in the genome (an rsID), explained in plain language with what published research has found it linked to, and how strong that link actually is.

Where does new variant data come from?

The public GWAS Catalog, checked every twenty minutes, plus variants added manually after research review. Every one passes the same quality gate before publishing.

Does being listed here mean a variant causes a condition?

No. Listing reflects an association from published research, not a diagnosis or a cause. Most common variants shift probability modestly rather than determining an outcome.

Can I search this list by gene or rsID?

Yes — the search box above matches gene symbols and rsIDs as well as trait names.