Variants linked to Celiac Disease

Continuously updated · newest added Oct 26, 2026

20,582 positions on this site are linked to Celiac Disease, out of 149,364 published in total. Each was published only after passing the same quality gate; being on this list is an association, not a diagnosis.

Strength of the evidence: all 2+ 3+ 4

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FGF2 protein levels

near FGF2 · rs534978656

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PON2 protein levels

PPP1R9A-AS1 · rs534340152

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GLIPR1 protein levels

near PLCB4 · rs534087838

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TLR3 protein levels

CYP4V2 · rs532291947

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GLIPR1 protein levels

near SFRP2 · rs531954951

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CHL1 protein levels

near LINC01266 · rs531399042

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CLUL1 protein levels

near LINC01925 · rs531389012

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HSBP1 protein levels

near FBRSL1 · rs4883583

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Mean corpuscular volume (UKB data field 30040)

near LNX1 · rs4864486

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CTRC protein levels

near MANEA · rs4601137

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LAIR2 protein levels

near KIR3DX1 · rs377685688

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POSTN protein levels

near FCGR2B · rs377188082

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IGSF21 protein levels

IGSF21 · rs3767109

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GLIPR1 protein levels

PTPA · rs376143624

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FGF5 protein levels

FGF5 · rs35757217

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PDGFRB protein levels

CARMN · rs353283

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L1CAM protein levels

EBF1 · rs35003579

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NID2 protein levels

GNG2 · rs28722890

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CD300E protein levels

near HLA-DQA1 · rs28651573

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Aspartate aminotransferase levels (UKB data field 30650)

TCEA2 · rs28638160

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Questions about variants on this site

What is a "variant" page on this site?

One specific position in the genome (an rsID), explained in plain language with what published research has found it linked to, and how strong that link actually is.

Where does new variant data come from?

The public GWAS Catalog, checked every twenty minutes, plus variants added manually after research review. Every one passes the same quality gate before publishing.

Does being listed here mean a variant causes a condition?

No. Listing reflects an association from published research, not a diagnosis or a cause. Most common variants shift probability modestly rather than determining an outcome.

Can I search this list by gene or rsID?

Yes — the search box above matches gene symbols and rsIDs as well as trait names.