Variants linked to Breast Cancer

Continuously updated · newest added Oct 22, 2026

233 positions on this site are linked to Breast Cancer, out of 108,020 published in total. Each was published only after passing the same quality gate; being on this list is an association, not a diagnosis.

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Sensitive

Breast cancer

ESR1 · rs140068132

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Sensitive

Breast cancer

PTHLH · rs10771399

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Sensitive

Breast cancer

EBF1 · rs1432679

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Sensitive

Breast cancer

TET2 · rs9790517

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Sensitive

Breast cancer

ADAM29 · rs6828523

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Sensitive

Breast cancer

ITPR1 · rs6762644

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Sensitive

Breast cancer

METAP1D · rs2016394

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Sensitive

Breast cancer

DIRC3 · rs16857609

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Sensitive

Breast cancer

SSBP4 · rs4808801

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Sensitive

Breast cancer

CDYL2 · rs13329835

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Sensitive

Breast cancer

COX11 · rs6504950

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Sensitive

Breast cancer

CCDC88C · rs941764

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Sensitive

Breast cancer

near MRPS30 · rs10941679

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Sensitive

Breast cancer

ESR1 · rs3757318

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Sensitive

Breast cancer

near ATF7IP · rs12422552

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Sensitive

Breast cancer

NTN4 · rs17356907

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Sensitive

Breast cancer

DKFZp761E198 · rs3903072

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Sensitive

Breast cancer

TOX3 · rs12922061

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Sensitive

Breast cancer

CHST9 · rs1436904

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Sensitive

Breast cancer

near FGFR2 · rs11199914

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Showing 20 of 233 · page 11 of 12

Questions about variants on this site

What is a "variant" page on this site?

One specific position in the genome (an rsID), explained in plain language with what published research has found it linked to, and how strong that link actually is.

Where does new variant data come from?

The public GWAS Catalog, checked every twenty minutes, plus variants added manually after research review. Every one passes the same quality gate before publishing.

Does being listed here mean a variant causes a condition?

No. Listing reflects an association from published research, not a diagnosis or a cause. Most common variants shift probability modestly rather than determining an outcome.

Can I search this list by gene or rsID?

Yes — the search box above matches gene symbols and rsIDs as well as trait names.