Sensitive

Squamous cell carcinoma (PheCode 172.22)

near TP63 · rs9834622

Where this position leads

Condition: Squamous Cell Carcinoma

rs9834622 Condition: Squamous Cell Carcinoma Squamous Cell Carcinoma Condition rs9834622 rs9834622 near TP63

What the study found

Who was studied 286 African American or Afro-Caribbean cases, 121,446 African American or Afro-Caribbean controls, 19,217 European ancestry cases, 419,674 European ancestry controls, 429 Hispanic or Latin American cases, 59,212 Hispanic or Latin American controls.

The effect Each copy of the G allele shifted the measure 0.0781 higher (95% confidence interval 0.055-0.101); p = 1 × 10−12.

How common The G allele had a frequency of about 52% in the people studied.

Where it sits Chromosome 3, band 3q28 — between genes, 149.1 kb from TP63.

What each result means

A/A No copy of the version the research linked to Squamous cell carcinoma (PheCode 172.22). This is the starting point the study compared everyone against.
A/G One copy of the version the research linked to Squamous cell carcinoma (PheCode 172.22). That is a smaller link than two copies.
G/G Two copies of the version the research linked to Squamous cell carcinoma (PheCode 172.22). That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Questions about rs9834622

What is rs9834622?

rs9834622 is a single position in the genome, in or near the near TP63 gene. Published research associates it with squamous cell carcinoma (phecode 172.22). A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs9834622 linked to?

On MyGeneLog this position is linked to Squamous Cell Carcinoma. The research behind each link, and its sources, are set out on that condition page.

Does having rs9834622 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs9834622 come from?

GWAS Catalog, Science (New York, N.Y.) 2024, PMID:39024449. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

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Squamous cell carcinoma (PheCode 172.22) (rs9834622). MyGeneLog™. https://www.mygenelog.com/variants/rs9834622

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