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Type 2 diabetes (PheCode 250.2)

near PPIAP23 · rs9523299

Where this position leads

Condition: Type 2 Diabetes

rs9523299 Condition: Type 2 Diabetes Type 2 Diabetes Condition rs9523299 rs9523299 near PPIAP23

What the study found

Who was studied 51,551 African American or Afro-Caribbean cases, 64,463 African American or Afro-Caribbean controls, 22,274 Hispanic or Latin American cases, 35,406 Hispanic or Latin American controls, 2,272 East Asian ancestry cases, 4,333 East Asian ancestry controls, 154,194 European ancestry cases, 278,454 European ancestry controls.

The effect Each copy of the G allele shifted the measure 0.0444 higher (95% confidence interval 0.034-0.055); p = 2 × 10−17.

How common The G allele had a frequency of about 72% in the people studied.

Where it sits Chromosome 13, band 13q31.3 — between genes, 30.4 kb from PPIAP23.

What each result means

A/A No copy of the version the research linked to Type 2 diabetes (PheCode 250.2). This is the starting point the study compared everyone against.
A/G One copy of the version the research linked to Type 2 diabetes (PheCode 250.2). That is a smaller link than two copies.
G/G Two copies of the version the research linked to Type 2 diabetes (PheCode 250.2). That is the strongest link of the three results. A link in a study is not a diagnosis.
Source
Diversity and scale: Genetic architecture of 2068 traits in the VA Million Veteran Program
Verma A, Huffman JE, Rodriguez A, Conery M, Liu M, Ho YL, Kim Y, Heise DA, Guare L, Panickan VA, Garcon H, Linares F
and 59 more — show all
Costa L, Goethert I, Tipton R, Honerlaw J, Davies L, Whitbourne S, Cohen J, Posner DC, Sangar R, Murray M, Wang X, Dochtermann DR, Devineni P, Shi Y, Nandi TN, Assimes TL, Brunette CA, Carroll RJ, Clifford R, Duvall S, Gelernter J, Hung A, Iyengar SK, Joseph J, Kember R, Kranzler H, Kripke CM, Levey D, Luoh SW, Merritt VC, Overstreet C, Deak JD, Grant SFA, Polimanti R, Roussos P, Shakt G, Sun YV, Tsao N, Venkatesh S, Voloudakis G, Justice A, Begoli E, Ramoni R, Tourassi G, Pyarajan S, Tsao P, O'Donnell CJ, Muralidhar S, Moser J, Casas JP, Bick AG, Zhou W, Cai T, Voight BF, Cho K, Gaziano JM, Madduri RK, Damrauer S, Liao KP
Science (New York, N.Y.) · 2024 · PMID 39024449 · open access

Questions about rs9523299

What is rs9523299?

rs9523299 is a single position in the genome, in or near the near PPIAP23 gene. Published research associates it with type 2 diabetes (phecode 250.2). A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs9523299 linked to?

On MyGeneLog this position is linked to Type 2 Diabetes. The research behind each link, and its sources, are set out on that condition page.

Does having rs9523299 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs9523299 come from?

GWAS Catalog, Science (New York, N.Y.) 2024, PMID:39024449. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

Type 2 diabetes (PheCode 250.2) (rs9523299). MyGeneLog™. https://www.mygenelog.com/variants/rs9523299

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