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Triglycerides in very large VLDL

near BUD13 · rs883863

Where this position leads

Condition: Age-Related Macular Degeneration

rs883863 Condition: Age-Related Macular Degeneration Age-Related Macular Degeneration Condition rs883863 rs883863 near BUD13

Strength of the evidence

1 / 4

Its strongest genetic-study result is p = 10−9, with 23 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 98,316 European ancestry individuals.

The effect Each copy of the A allele shifted the measure 0.00322 higher (95% confidence interval 0.0021-0.0043); p = 8 × 10−9.

How common The A allele had a frequency of about 31% in the people studied.

Where it sits Chromosome 11, band 11q23.3 — between genes, 17.6 kb from LINC02151.

How common each version is

AG
Korean KRGDB
A 28.6% · G 71.4%
Korean Korea4K
A 27.1% · G 72.9%
Japanese ToMMo
A 25.6% · G 74.4%
Vietnamese
A 15.9% · G 84.1%
World gnomAD
A 26.3% · G 73.7%
World 1000 Genomes
A 22.5% · G 77.5%
World TOPMed
A 26.6% · G 73.5%

The share of all copies of this position that are each version. Source: the population studies published in dbSNP (US NCBI); each row names its study.

What each result means

A/A Two copies of the version the research linked to Triglycerides in very large VLDL. That is the strongest link of the three results. A link in a study is not a diagnosis.
A/G One copy of the version the research linked to Triglycerides in very large VLDL. That is a smaller link than two copies.
G/G No copy of the version the research linked to Triglycerides in very large VLDL. This is the starting point the study compared everyone against.
Source

Questions about rs883863

What is rs883863?

rs883863 is a single position in the genome, in or near the near BUD13 gene. Published research associates it with triglycerides in very large vldl. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs883863 linked to?

On MyGeneLog this position is linked to Age-Related Macular Degeneration. The research behind each link, and its sources, are set out on that condition page.

Does having rs883863 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs883863 come from?

GWAS Catalog, Ophthalmology science 2024, PMID:39091897. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

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Triglycerides in very large VLDL (rs883863). MyGeneLog™. https://www.mygenelog.com/variants/rs883863

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