Standard

Vertical cup-disc ratio (multi-trait analysis)

STK38 · rs72852338

Where this position leads

Condition: Glaucoma

rs72852338 Condition: Glaucoma Glaucoma Condition rs72852338 rs72852338 STK38

What the study found

Who was studied 90,939 European ancestry individuals.

The effect Each copy of the A allele shifted the measure 0.0075 lower; p = 8 × 10−13.

How common The A allele had a frequency of about 78% in the people studied.

Where it sits Chromosome 6, band 6p21.31 — between genes, 7.3 kb from SRSF3.

What each result means

A/A Two copies of the version the research linked to Vertical cup-disc ratio (multi-trait analysis). That is the strongest link of the three results. A link in a study is not a diagnosis.
A/C One copy of the version the research linked to Vertical cup-disc ratio (multi-trait analysis). That is a smaller link than two copies.
C/C No copy of the version the research linked to Vertical cup-disc ratio (multi-trait analysis). This is the starting point the study compared everyone against.
Source

Questions about rs72852338

What is rs72852338?

rs72852338 is a single position in the genome, in or near the STK38 gene. Published research associates it with vertical cup-disc ratio (multi-trait analysis). A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs72852338 linked to?

On MyGeneLog this position is linked to Glaucoma. The research behind each link, and its sources, are set out on that condition page.

Does having rs72852338 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs72852338 come from?

GWAS Catalog, Nature genetics 2020, PMID:31959993. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

Vertical cup-disc ratio (multi-trait analysis) (rs72852338). MyGeneLog™. https://www.mygenelog.com/variants/rs72852338

← See all variants