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Concentration of small HDL particles

SBF2 · rs7106998

Where this position leads

Condition: Age-Related Macular Degeneration

rs7106998 Condition: Age-Related Macular Degeneration Age-Related Macular Degeneration Condition rs7106998 rs7106998 SBF2

Strength of the evidence

1 / 4

Its strongest genetic-study result is p = 10−14, with 4 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 98,316 European ancestry individuals.

The effect Each copy of the T allele shifted the measure 0.000187 lower (95% confidence interval 0.00013-0.00024); p = 1 × 10−11.

How common The T allele had a frequency of about 43% in the people studied.

Where it sits Chromosome 11, band 11p15.4 — in an intron of SBF2.

What each result means

C/C No copy of the version the research linked to Concentration of small HDL particles. This is the starting point the study compared everyone against.
C/T One copy of the version the research linked to Concentration of small HDL particles. That is a smaller link than two copies.
T/T Two copies of the version the research linked to Concentration of small HDL particles. That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Questions about rs7106998

What is rs7106998?

rs7106998 is a single position in the genome, in or near the SBF2 gene. Published research associates it with concentration of small hdl particles. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs7106998 linked to?

On MyGeneLog this position is linked to Age-Related Macular Degeneration. The research behind each link, and its sources, are set out on that condition page.

Does having rs7106998 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs7106998 come from?

GWAS Catalog, Ophthalmology science 2024, PMID:39091897. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

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Concentration of small HDL particles (rs7106998). MyGeneLog™. https://www.mygenelog.com/variants/rs7106998

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