Standard

PR interval

SCN10A · rs6800541

Where this position leads

Condition: Cardiac Conduction Intervals (PR Interval and QRS Duration)

rs6800541 Condition: Cardiac Conduction Intervals (PR Interval and QRS Duration) Cardiac Conduction Intervals (PR In… Condition Topic: Heart and circulation Heart and circulation Topic rs6800541 rs6800541 SCN10A

Solid lines are connections this site curates. Dashed lines mean the two ends share a research paper — worth knowing, and not a claim that one explains the other.

What the study found

Who was studied 28,517 European ancestry individuals.

The effect Each copy of the C allele shifted the measure 3.77 ms higher (95% confidence interval 3.37-4.17); p = 2 × 10−74.

How common The C allele had a frequency of about 40% in the people studied.

Where it sits Chromosome 3, band 3p22.2 — in an intron of SCN10A.

What each result means

C/C Two copies of the version the research linked to PR interval. That is the strongest link of the three results. A link in a study is not a diagnosis.
C/T One copy of the version the research linked to PR interval. That is a smaller link than two copies.
T/T No copy of the version the research linked to PR interval. This is the starting point the study compared everyone against.
Source

What people read about alongside this

Papers in Europe PMC whose title or abstract names both this rsID and that subject. A shared paper means somebody wrote about the two together — it is not a claim that this position explains the subject.

Questions about rs6800541

What is rs6800541?

rs6800541 is a single position in the genome, in or near the SCN10A gene. Published research associates it with pr interval. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs6800541 linked to?

On MyGeneLog this position is linked to Cardiac Conduction Intervals (PR Interval and QRS Duration). The research behind each link, and its sources, are set out on that condition page.

What do people read about alongside rs6800541?

Subjects that appear in the title or abstract of the same papers as this rsID include heart and circulation (4 papers). A shared paper means somebody wrote about the two together; it is not a claim that this position explains the topic.

Does having rs6800541 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs6800541 come from?

GWAS Catalog, Nat Genet 2010, PMID:20062060. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

PR interval (rs6800541). MyGeneLog™. https://www.mygenelog.com/variants/rs6800541

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