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Total free cholesterol levels

SLC22A1 · rs62440901

Where this position leads

Condition: Age-Related Macular Degeneration

rs62440901 Condition: Age-Related Macular Degeneration Age-Related Macular Degeneration Condition rs62440901 rs62440901 SLC22A1

What the study found

Who was studied 98,316 European ancestry individuals.

The effect Each copy of the T allele shifted the measure 0.015 higher (95% confidence interval 0.0099-0.02); p = 3 × 10−9.

How common The T allele had a frequency of about 15% in the people studied.

Where it sits Chromosome 6, band 6q25.3 — in an intron of SLC22A1.

What each result means

C/C Published research associates this genotype with typical/baseline likelihood of Total free cholesterol levels — no copies of the reported risk allele.
C/T Published research associates this genotype (one copy of the reported risk allele) with an intermediate association with Total free cholesterol levels.
T/T Published research associates this genotype (two copies of the reported risk allele) with a higher likelihood of Total free cholesterol levels compared to the general population.
Source

Questions about rs62440901

What is rs62440901?

rs62440901 is a single position in the genome, in or near the SLC22A1 gene. Published research associates it with total free cholesterol levels. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs62440901 linked to?

On MyGeneLog this position is linked to Age-Related Macular Degeneration. The research behind each link, and its sources, are set out on that condition page.

Does having rs62440901 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs62440901 come from?

GWAS Catalog, Ophthalmology science 2024, PMID:39091897. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

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Total free cholesterol levels (rs62440901). MyGeneLog™. https://www.mygenelog.com/variants/rs62440901

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