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Acute gastritis (PheCode 535.1)

near KCNF1 · rs548414295

Where this position leads

Condition: Acute Gastritis

rs548414295 Condition: Acute Gastritis Acute Gastritis Condition rs548414295 rs548414295 near KCNF1

What the study found

Who was studied 758 African American or Afro-Caribbean cases, 117,763 African American or Afro-Caribbean controls, 1,641 European ancestry cases, 441,506 European ancestry controls, 292 Hispanic or Latin American cases, 58,221 Hispanic or Latin American controls.

The effect Each copy of the T allele shifted the measure 1.8 lower (95% confidence interval 1.74-1.87); p = 3 × 10−11.

How common The T allele had a frequency of about 100% in the people studied.

Where it sits Chromosome 2, band 2p25.1 — between genes, 54.8 kb from KCNF1.

What each result means

A/A No copy of the version the research linked to Acute gastritis (PheCode 535.1). This is the starting point the study compared everyone against.
A/T One copy of the version the research linked to Acute gastritis (PheCode 535.1). That is a smaller link than two copies.
T/T Two copies of the version the research linked to Acute gastritis (PheCode 535.1). That is the strongest link of the three results. A link in a study is not a diagnosis.
Source

Questions about rs548414295

What is rs548414295?

rs548414295 is a single position in the genome, in or near the near KCNF1 gene. Published research associates it with acute gastritis (phecode 535.1). A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs548414295 linked to?

On MyGeneLog this position is linked to Acute Gastritis. The research behind each link, and its sources, are set out on that condition page.

Does having rs548414295 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs548414295 come from?

GWAS Catalog, Science (New York, N.Y.) 2024, PMID:39024449. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

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Acute gastritis (PheCode 535.1) (rs548414295). MyGeneLog™. https://www.mygenelog.com/variants/rs548414295

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