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HLA DR on myeloid Dendritic Cell

near HLA-DRB1 · rs35525122

Strength of the evidence

3 / 4

Its strongest genetic-study result is p = 10−65, with 1 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 2,872 Sardinian (founder/genetic isolate) ancestry individuals.

The effect Each copy of the A allele shifted the measure 0.853 higher (95% confidence interval 0.76-0.95); p = 1 × 10−65.

How common The A allele had a frequency of about 11% in the people studied.

Where it sits Chromosome 6, band 6p21.32 — between genes, 3.7 kb from HLA-DRB1.

What each result means

A/A Two copies of the version the research linked to HLA DR on myeloid Dendritic Cell. That is the strongest link of the three results. A link in a study is not a diagnosis.
A/C One copy of the version the research linked to HLA DR on myeloid Dendritic Cell. That is a smaller link than two copies.
C/C No copy of the version the research linked to HLA DR on myeloid Dendritic Cell. This is the starting point the study compared everyone against.
Source

Questions about rs35525122

What is rs35525122?

rs35525122 is a single position in the genome, in or near the near HLA-DRB1 gene. Published research associates it with hla dr on myeloid dendritic cell. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

Does having rs35525122 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs35525122 come from?

GWAS Catalog, Nature genetics 2020, PMID:32929287. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

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HLA DR on myeloid Dendritic Cell (rs35525122). MyGeneLog™. https://www.mygenelog.com/variants/rs35525122

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