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Free cholesterol in large HDL

PIGT · rs35374946

Where this position leads

Condition: Age-Related Macular Degeneration

rs35374946 Condition: Age-Related Macular Degeneration Age-Related Macular Degeneration Condition rs35374946 rs35374946 PIGT

What the study found

Who was studied 98,316 European ancestry individuals.

The effect Each copy of the C allele shifted the measure 0.0045 higher (95% confidence interval 0.0029-0.0061); p = 1 × 10−8.

How common The C allele had a frequency of about 3% in the people studied.

Where it sits Chromosome 20, band 20q13.12 — in an intron of PIGT.

What each result means

C/C Published research associates this genotype (two copies of the reported risk allele) with a higher likelihood of Free cholesterol in large HDL compared to the general population.
C/T Published research associates this genotype (one copy of the reported risk allele) with an intermediate association with Free cholesterol in large HDL.
T/T Published research associates this genotype with typical/baseline likelihood of Free cholesterol in large HDL — no copies of the reported risk allele.
Source

Questions about rs35374946

What is rs35374946?

rs35374946 is a single position in the genome, in or near the PIGT gene. Published research associates it with free cholesterol in large hdl. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs35374946 linked to?

On MyGeneLog this position is linked to Age-Related Macular Degeneration. The research behind each link, and its sources, are set out on that condition page.

Does having rs35374946 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs35374946 come from?

GWAS Catalog, Ophthalmology science 2024, PMID:39091897. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

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Free cholesterol in large HDL (rs35374946). MyGeneLog™. https://www.mygenelog.com/variants/rs35374946

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