Standard

Metabolic traits

LEF1 · rs2650000

Where this position leads

Condition: Blood Metabolite Levels

rs2650000 Condition: Blood Metabolite Levels Blood Metabolite Levels Condition rs2650000 rs2650000 LEF1

What the study found

Who was studied 4,763 Northern Finnish founder individuals.

The effect Each copy of the A allele shifted the measure 0.4 mmol/l lower (95% confidence interval 0.25-0.55); p = 3 × 10−11.

How common The A allele had a frequency of about 45% in the people studied.

Where it sits Chromosome 12, band 12q24.31 — in an intron of HNF1A-AS1.

What each result means

A/A Two copies of the version the research linked to Metabolic traits. That is the strongest link of the three results. A link in a study is not a diagnosis.
A/C One copy of the version the research linked to Metabolic traits. That is a smaller link than two copies.
C/C No copy of the version the research linked to Metabolic traits. This is the starting point the study compared everyone against.
Source

What people read about alongside this

Papers in Europe PMC whose title or abstract names both this rsID and that subject. A shared paper means somebody wrote about the two together — it is not a claim that this position explains the subject.

Questions about rs2650000

What is rs2650000?

rs2650000 is a single position in the genome, in or near the LEF1 gene. Published research associates it with metabolic traits. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs2650000 linked to?

On MyGeneLog this position is linked to Blood Metabolite Levels. The research behind each link, and its sources, are set out on that condition page.

What do people read about alongside rs2650000?

Subjects that appear in the title or abstract of the same papers as this rsID include blood sugar and insulin (2 papers), alcohol and the flush (1 papers), heart and circulation (1 papers). A shared paper means somebody wrote about the two together; it is not a claim that this position explains the topic.

Does having rs2650000 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs2650000 come from?

GWAS Catalog, Nat Genet 2008, PMID:19060910. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

Metabolic traits (rs2650000). MyGeneLog™. https://www.mygenelog.com/variants/rs2650000

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