Standard

Phospholipids to Total Lipids in LDL percentage

near CACNA1C · rs150685278

Where this position leads

Condition: Age-Related Macular Degeneration

rs150685278 Condition: Age-Related Macular Degeneration Age-Related Macular Degeneration Condition rs150685278 rs150685278 near CACNA1C

Strength of the evidence

1 / 4

Its strongest genetic-study result is p = 10−9, with 2 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 98,316 European ancestry individuals.

The effect Each copy of the C allele shifted the measure 0.0482 higher (95% confidence interval 0.032-0.064); p = 3 × 10−9.

How common The C allele had a frequency of about 1% in the people studied.

Where it sits Chromosome 12, band 12p13.33 — in an intron of ITFG2-AS1.

What each result means

C/C Two copies of the version the research linked to Phospholipids to Total Lipids in LDL percentage. That is the strongest link of the three results. A link in a study is not a diagnosis.
C/T One copy of the version the research linked to Phospholipids to Total Lipids in LDL percentage. That is a smaller link than two copies.
T/T No copy of the version the research linked to Phospholipids to Total Lipids in LDL percentage. This is the starting point the study compared everyone against.
Source

Questions about rs150685278

What is rs150685278?

rs150685278 is a single position in the genome, in or near the near CACNA1C gene. Published research associates it with phospholipids to total lipids in ldl percentage. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs150685278 linked to?

On MyGeneLog this position is linked to Age-Related Macular Degeneration. The research behind each link, and its sources, are set out on that condition page.

Does having rs150685278 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs150685278 come from?

GWAS Catalog, Ophthalmology science 2024, PMID:39091897. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

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Phospholipids to Total Lipids in LDL percentage (rs150685278). MyGeneLog™. https://www.mygenelog.com/variants/rs150685278

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