Standard

Refractive astigmatism

LINC00340 · rs12196123

Where this position leads

Condition: Corneal Astigmatism

rs12196123 Condition: Corneal Astigmatism Corneal Astigmatism Condition rs12196123 rs12196123 LINC00340

What the study found

Who was studied 88,005 European ancestry individuals.

The effect Each copy of the T allele shifted the measure 0.022 dioptres lower (95% confidence interval 0.016-0.028); p = 1 × 10−11.

Where it sits Chromosome 6, band 6p22.3 — in an intron of CASC15.

What each result means

C/C Published research associates this genotype with typical/baseline likelihood of Refractive astigmatism — no copies of the reported risk allele.
C/T Published research associates this genotype (one copy of the reported risk allele) with an intermediate association with Refractive astigmatism.
T/T Published research associates this genotype (two copies of the reported risk allele) with a higher likelihood of Refractive astigmatism compared to the general population.
Source

Questions about rs12196123

What is rs12196123?

rs12196123 is a single position in the genome, in or near the LINC00340 gene. Published research associates it with refractive astigmatism. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs12196123 linked to?

On MyGeneLog this position is linked to Corneal Astigmatism. The research behind each link, and its sources, are set out on that condition page.

Does having rs12196123 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs12196123 come from?

GWAS Catalog, Hum Genet 2018, PMID:30306274. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

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Refractive astigmatism (rs12196123). MyGeneLog™. https://www.mygenelog.com/variants/rs12196123

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