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Free Cholesterol to Cholesterol in Small HDL percentage

SCARB1 · rs10773112

Where this position leads

Condition: Age-Related Macular Degeneration

rs10773112 Condition: Age-Related Macular Degeneration Age-Related Macular Degeneration Condition rs10773112 rs10773112 SCARB1

Strength of the evidence

1 / 4

Its strongest genetic-study result is p = 10−12, with 80 associations in the GWAS Catalog.

How this is scored

4: ClinVar disease-causing, reviewed by an expert panel or a guideline (3–4 stars). 3: ClinVar, several labs agreeing (2 stars), or a genetic study at p ≤ 10−50. 2: ClinVar from one lab (1 star), or p ≤ 10−20. 1: ClinVar submitted without criteria (0 stars), or genome-wide significance (p ≤ 5×10−8). The higher of the two counts. It says how solid the evidence is, not whether it matters for a particular person.

What the study found

Who was studied 98,316 European ancestry individuals.

The effect Each copy of the C allele shifted the measure 0.0292 lower (95% confidence interval 0.019-0.04); p = 2 × 10−8.

How common The C allele had a frequency of about 28% in the people studied.

Where it sits Chromosome 12, band 12q24.31 — in an intron of SCARB1.

What each result means

C/C Two copies of the version the research linked to Free Cholesterol to Cholesterol in Small HDL percentage. That is the strongest link of the three results. A link in a study is not a diagnosis.
C/T One copy of the version the research linked to Free Cholesterol to Cholesterol in Small HDL percentage. That is a smaller link than two copies.
T/T No copy of the version the research linked to Free Cholesterol to Cholesterol in Small HDL percentage. This is the starting point the study compared everyone against.
Source

Questions about rs10773112

What is rs10773112?

rs10773112 is a single position in the genome, in or near the SCARB1 gene. Published research associates it with free cholesterol to cholesterol in small hdl percentage. A single variant does not decide an outcome — it shifts a probability, and for most common variants the shift is small.

What conditions is rs10773112 linked to?

On MyGeneLog this position is linked to Age-Related Macular Degeneration. The research behind each link, and its sources, are set out on that condition page.

Does having rs10773112 mean I will get this?

No. Common variants like this one move a probability slightly and, on their own, rarely decide anything about one person. Nothing on this page is a diagnosis, and health decisions should be made with a clinician who can see your whole picture.

Where does the information about rs10773112 come from?

GWAS Catalog, Ophthalmology science 2024, PMID:39091897. Every variant on MyGeneLog comes from public primary sources and is published with its citation and the date it was checked.

Quoting this page

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Free Cholesterol to Cholesterol in Small HDL percentage (rs10773112). MyGeneLog™. https://www.mygenelog.com/variants/rs10773112

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