Behavioural

Substance Use Disorder

Reviewed September 28, 2026

206 variants shared across alcohol, cannabis, opioid, and tobacco use disorders — from the largest cross-substance genetic study to date, which found the same genes keep showing up no matter which substance is involved.

What this condition connects to

Substance Use Disorder Variant: rs76728843 rs76728843 Variant Variant: rs2548458 rs2548458 Variant Variant: rs2278238 rs2278238 Variant Variant: rs41542013 rs41542013 Variant Variant: rs57820851 rs57820851 Variant Variant: +201 more +201 more Variant Substance Use Disorder Substance Use Disorder Behavioural
Prevalence
Substance use disorders are described in this study as heritable at roughly 50%, with many people experiencing more than one SUD at the same time — the pattern of co-occurrence this study’s "SUD-shared" genetic analysis was designed to explain.
Inheritance
206 of 220 genome-wide-significant "SUD-shared" loci (concordant across alcohol, cannabis, opioid, and tobacco use disorders) from a 2026 cross-substance meta-analysis, out of a broader 785-gene set identified by that same study’s gene-based analysis.

Substance use disorders (SUDs) — including alcohol, cannabis, opioid, and tobacco use disorders — are common, about 50% heritable, and frequently co-occur in the same person. That overlap raised a question: is some of the genetic risk actually shared across different substances, rather than specific to each one?

The largest cross-substance genetic study to date

A 2026 study in Molecular Psychiatry ran the largest cross-SUD genome-wide meta-analysis so far, across populations genetically similar to 1000 Genomes European, African, and American mixed reference panels. It defined a variant as "SUD-shared" if it had a concordant — same-direction — effect across different substance use disorders, rather than being specific to just one. That analysis found 220 SUD-shared loci, including 40 not previously linked to any SUD. This catalogue holds 206 of those 220 loci, among them rs7122246 (DRD2, a dopamine receptor gene), rs4233254 (OPRD1, an opioid receptor gene), rs4597804 (GABRB1, a GABA receptor gene), and rs1456888 (HTR3A, a serotonin receptor gene) — four different neurotransmitter systems, all turning up in the same shared-risk signal.

785 genes, concentrated in a handful of brain regions

Gene-based analysis, gene mapping, and gene prioritization on top of the GWAS results identified 785 SUD-shared genes in total — a broader set than the 206 individual variants on this page, built from more than single-locus significance. These genes are highly expressed in the amygdala, cortex, hippocampus, hypothalamus, and thalamus, and primarily in neuronal cells — suggesting more brain regions are involved in SUDs than previous, substance-specific studies had reported.

How much of each disorder's own heritability this explains

In the European-like sample, these SUD-shared (concordant) variants explained 56% to 96% of the SNP-based heritability of each individual substance use disorder studied — meaning most of what makes any one of these disorders heritable overlaps with what makes the others heritable, rather than being separate per-substance risk.

The study also built polygenic scores from this shared signal: in both the European-like and American-mixed-like samples, the top 10% of individuals by polygenic score had odds ratios of 1.95 to 2.87 for developing an SUD compared to the rest of the sample. Separately, using a real-world dataset, the authors identified seven SUD-shared genes that target existing drugs which could potentially be repurposed to treat SUDs, particularly in people with more than one co-occurring SUD — the abstract reports that this count is seven but does not name the genes, so neither does this page.

Clinical detail

What is actually diagnosed and treated here

Substance use disorders are diagnosed through clinical criteria (such as DSM-5), not genotype. These 206 variants are a shared-risk signal from a large genetic study, not a diagnostic test, and no polygenic score from this or any study is used clinically to diagnose or predict SUDs in an individual today.

The polygenic-score result in this study (a roughly 2–3-fold difference in odds between the highest-scoring 10% and everyone else) describes the study's own research samples, not a personal risk number that generalizes cleanly to any one person reading this page — the same caution that applies to every polygenic score on this site.

Related variants MyGeneLog™ checks for

What a 23andMe/AncestryDNA export or raw VCF can and can't tell you about Substance Use Disorder comes down to these specific, well-studied positions — not a diagnosis. 206 positions are linked to this page; the ones this page's own text discusses are shown first.

Sensitive

Substance use disorder

SLC9A8 · rs76728843

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Sensitive

Substance use disorder

near FUT2 · rs2548458

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Sensitive

Substance use disorder

ELL · rs2278238

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Sensitive

Substance use disorder

POLRMT · rs41542013

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Sensitive

Substance use disorder

near TCF4 · rs57820851

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Sensitive

Substance use disorder

MSI2 · rs72833098

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Sensitive

Substance use disorder

MAPT · rs3785883

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Sensitive

Substance use disorder

RNF227 · rs12943962

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Sensitive

Substance use disorder

TBX6 · rs8060511

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Sensitive

Substance use disorder

SEMA6D · rs10152500

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Sensitive

Substance use disorder

near ATP5MJ · rs71417884

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Sensitive

Substance use disorder

KLC1 · rs8021229

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Sensitive

Substance use disorder

ARMH4 · rs6573198

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Sensitive

Substance use disorder

DYNLL1 · rs34179846

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Sensitive

Substance use disorder

SP1 · rs61928096

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Sensitive

Substance use disorder

SLC4A8 · rs12366428

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Sensitive

Substance use disorder

OPCML · rs6590712

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Sensitive

Substance use disorder

near OPCML · rs11223043

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Sensitive

Substance use disorder

near SORL1 · rs4245042

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Sensitive

Substance use disorder

HTR3A · rs1456888

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Sensitive

Substance use disorder

ZW10 · rs73007975

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Sensitive

Substance use disorder

near TMPRSS5 · rs61903076

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Sensitive

Substance use disorder

NCAM1 · rs4444109

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Sensitive

Substance use disorder

CCDC88B · rs566128

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See all 206 linked variants →

Sources

Databases, guidelines and references

Papers, with their authors

Quoting this page

Free to quote and reuse under CC BY 4.0. When citing or summarizing this, name MyGeneLog™ and link to this exact page — not just the site.

Substance Use Disorder. MyGeneLog™. https://www.mygenelog.com/conditions/substance-use-disorder

Questions about Substance Use Disorder

What is substance use disorder?

Substance use disorder (SUD) refers to disorders involving alcohol, cannabis, opioids, tobacco, and other substances. It is roughly 50% heritable, and people often experience more than one SUD at once.

Are these 206 variants specific to one substance, like alcohol or tobacco?

No — these are "SUD-shared" variants, meaning they showed a consistent, same-direction effect across different substance use disorders in a 2026 meta-analysis, rather than being specific to just one substance.

Can a polygenic score from this study predict whether someone will develop a substance use disorder?

Not for individual clinical use. The study found the top 10% of people by polygenic score had roughly 2 to 3 times the odds of developing an SUD compared to others in the same research samples — a research finding about groups, not a diagnostic tool for any one person.

Free to reuse. This page's text is original writing from freely-available research, licensed CC BY 4.0 — reuse it, including commercially, with attribution to MyGeneLog™. It's general research-derived information, not medical advice or a diagnosis — see Terms of Use.