Hematologic

Monocyte Count

Reviewed September 11, 2026 4 views

How many monocytes — the white blood cells that become macrophages, the immune system's general-purpose cleanup and signalling cells — circulate in a person's blood. A measurement rather than a disease, the same way this site's C-reactive protein page is: a number a blood test reports, with some of its variation explained by common genetics.

What this condition connects to

Monocyte Count Variant: rs2124440 rs2124440 Variant Variant: rs13417564 rs13417564 Variant Variant: rs150449635 rs150449635 Variant Variant: rs34236350 rs34236350 Variant Variant: rs708727 rs708727 Variant Variant: +6 more +6 more Variant Monocyte Count Monocyte Count Hematologic
Prevalence
A routine blood measurement, not a disease. Astle et al. 2016 tested 29.5 million variants against 36 blood cell traits in 173,480 UK Biobank and INTERVAL participants, contributing eight of the nine variants on this page; the ninth (ITGA4) is a genome-wide significant replication in an eMERGE Network study of 11,014 participants (PMID:23314186). Mendelian randomization in the larger study linked blood cell traits generally to autoimmune disease, schizophrenia and coronary heart disease (PMID:27863252).
Inheritance
Nine common variants, each contributing a small, statistically real share of the variation in monocyte count. Two (CX3CR1, CCR3) sit near genes with a plausible general role in immune cell trafficking; the others have no established specific mechanism in monocyte biology.

Monocytes are white blood cells that circulate briefly before moving into tissue and becoming macrophages or dendritic cells — the immune system's general-purpose cleanup crew and one of its main ways of signalling other immune cells into action. A monocyte count is a routine part of a complete blood count, and like most blood cell measurements, it varies between people partly for genetic reasons.

One very large study behind most of these

Astle et al. 2016 tested 29.5 million genetic variants against 36 different blood cell traits — red cells, white cells and platelets — in 173,480 people from the UK Biobank and INTERVAL studies, one of the largest blood-trait genetic studies done. Eight of the nine variants on this page come from that one study. Two of them sit near genes with an obvious reason to matter here: CX3CR1 and CCR3 are both chemokine receptors — proteins immune cells use to sense chemical signals and move toward them — with CX3CR1 specifically well known for guiding monocytes themselves. The other loci (SLC41A1, ACOXL, GPR35, CDC5L, GPR116, and a long non-coding RNA) do not have an established, specific role in monocyte biology, and are reported here as real statistical findings rather than dressed up with an explanation the study itself does not provide.

The ninth variant, near ITGA4 (an integrin gene — integrins are proteins immune cells use to physically stick to blood vessel walls before moving into tissue, another biologically sensible connection), comes from a separate study of 11,014 participants in the eMERGE Network (a US electronic-health-records genomics consortium). It was not that study's own new discovery — ITGA4 was already a known monocyte-count locus, and this study replicated it at genome-wide significance.

The Astle study's broader finding, beyond any one variant, is worth stating: using Mendelian randomization, it linked blood cell measurements genetically to autoimmune disease, schizophrenia and coronary heart disease — and separately found that some previously assumed links between blood cell counts and cardiovascular disease may not be causal after all. That is a finding about the field's methods as much as about monocytes specifically.

Clinical detail

What is actually measured and used here

Monocyte count is measured directly by a blood test — a complete blood count with differential — not estimated from genotype. An abnormal count is interpreted by a clinician in the context of symptoms and other lab values; it can reflect infection, inflammation, a blood disorder, or nothing significant at all. None of the variants on this page changes how that result is read.

Nine variants explaining part of the variation in one blood cell count is a modest, honest picture — this is population-level genetics of a routine lab measurement, not a diagnosis of anything. The chemokine-receptor genes here (CX3CR1, CCR3) have a real, described role in immune cell trafficking generally; that is a reasonable biological story, not proof of what these specific variants do mechanistically.

Related variants MyGeneLog checks for

What a 23andMe/AncestryDNA export or raw VCF can and can't tell you about Monocyte Count comes down to these specific, well-studied positions — not a diagnosis.

Standard

Monocyte count

ITGA4 · rs2124440

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Standard

Monocyte count

AC074391.1 · rs13417564

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Standard

Monocyte count

ACOXL · rs150449635

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Standard

Monocyte count

GPR35 · rs34236350

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Standard

Monocyte count

SLC41A1 · rs708727

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Standard

Monocyte count

CCR3 · rs13325613

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Standard

Monocyte count

GPR116 · rs2012011

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Standard

Monocyte count

CX3CR1 · rs3732378

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Standard

Monocyte count

near CDC5L · rs75492293

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Standard

Monocyte count

NKX2-3 · rs11190141

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Standard

Monocyte count

IKZF1 · rs78697948

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Sources

Databases, guidelines and references

Papers, with their authors

Frequently asked questions

Can these variants predict my monocyte count or diagnose a blood disorder?

No. Monocyte count is measured directly by a blood test. These variants explain a small, population-level share of the variation between people and are not used to estimate or diagnose anything for an individual.

Why do CX3CR1 and CCR3 make more biological sense than the other genes here?

Both are chemokine receptors — proteins immune cells use to sense and move toward chemical signals — and CX3CR1 specifically has an established role in guiding monocytes. The other genes on this page do not have that kind of established connection, and this page says so rather than implying they all have equally clear roles.

What did the large 2016 study find beyond these individual variants?

Using a method called Mendelian randomization, it linked blood cell measurements genetically to autoimmune disease, schizophrenia and coronary heart disease, and found evidence that some previously assumed links between blood cell counts and cardiovascular disease may not actually be causal.

Is an abnormal monocyte count something to worry about?

That is a question for a clinician interpreting it alongside symptoms and other lab results — it can reflect infection, inflammation, a blood disorder, or nothing significant. This page and its variants play no role in that interpretation.

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