Variants linked to Systemic Lupus Erythematosus

Continuously updated · newest added Oct 24, 2026

723 positions on this site are linked to Systemic Lupus Erythematosus, out of 112,859 published in total. Each was published only after passing the same quality gate; being on this list is an association, not a diagnosis.

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Sensitive

Systemic lupus erythematosus

near FCGR2A · rs7522794

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Sensitive

Systemic lupus erythematosus

ABHD16A · rs805278

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Sensitive

Systemic lupus erythematosus

near RPL15P4 · rs6924459

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Sensitive

Systemic lupus erythematosus

near HLA-DOA · rs206766

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Sensitive

Systemic lupus erythematosus

LINC00529 · rs10481454

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Sensitive

Systemic lupus erythematosus

near HLA-DMB · rs116247546

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Sensitive

Systemic lupus erythematosus

CD80 · rs9826169

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Sensitive

Systemic lupus erythematosus

near CYCSP20 · rs116111303

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Sensitive

Systemic lupus erythematosus

near PPT2 · rs12213851

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Sensitive

Systemic lupus erythematosus

near MTCO3P1 · rs17219281

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Sensitive

Systemic lupus erythematosus

CLEC16A · rs11648049

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Sensitive

Systemic lupus erythematosus

near HLA-C · rs2844632

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Sensitive

Systemic lupus erythematosus

near HLA-C · rs2017772

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Sensitive

Systemic lupus erythematosus

near TSBP1-AS1 · rs439303

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Sensitive

Systemic lupus erythematosus

FAM167A · rs11779875

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Sensitive

Systemic lupus erythematosus

STAT4 · rs35672585

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Sensitive

Systemic lupus erythematosus

near HLA-DQA1 · rs9271502

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Sensitive

Systemic lupus erythematosus

near HLA-DRB1 · rs7768875

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Sensitive

Systemic lupus erythematosus

near ITGAM · rs141505282

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Sensitive

Systemic lupus erythematosus

near TSBP1-AS1 · rs28732209

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Questions about variants on this site

What is a "variant" page on this site?

One specific position in the genome (an rsID), explained in plain language with what published research has found it linked to, and how strong that link actually is.

Where does new variant data come from?

The public GWAS Catalog, checked every twenty minutes, plus variants added manually after research review. Every one passes the same quality gate before publishing.

Does being listed here mean a variant causes a condition?

No. Listing reflects an association from published research, not a diagnosis or a cause. Most common variants shift probability modestly rather than determining an outcome.

Can I search this list by gene or rsID?

Yes — the search box above matches gene symbols and rsIDs as well as trait names.