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Variants linked to Epilepsy

Continuously updated · newest added Nov 11, 2026

20,983 positions on this site are linked to Epilepsy, out of 2,512,094 published in total. Each was published only after passing the same quality gate; being on this list is an association, not a diagnosis.

Strength of the evidence: all 2+ 3+ 4 Connections: all only those linked to a condition, drug or sense

← Back to Epilepsy

Standard

Idiopathic generalized epilepsy

CACNA1H · rs777897759

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Standard

Progressive myoclonic epilepsy

SCARB2 · rs149997095

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Standard

Familial sleep-related hypermotor epilepsy

CHRNA2 · rs933808461

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Standard

Pyridoxine-dependent epilepsy

ALDH7A1 · rs370624118

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Sensitive

Generalized epilepsy-paroxysmal dyskinesia syndrome

KCNMA1 · rs142210216

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Standard

Progressive myoclonic epilepsy type 7

KCNC1 · rs1849236683

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Standard

Epilepsy

CSNK2A1 · rs2514662627

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Standard

Familial temporal lobe epilepsy 5

CPA6 · rs61738009

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Standard

Epilepsy, idiopathic generalized, susceptibility to, 13

GABRA1 · rs376699435

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Standard

Epilepsy, familial adult myoclonic, 5

CNTN2 · rs116647440

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Standard

Progressive myoclonic epilepsy

EPM2A · rs765820100

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Sensitive

Microcephaly-intellectual disability-sensorineural hearing loss-epilepsy-abnormal muscle tone syndrome

AFG2A · rs756560225

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Standard

Epilepsy, familial focal, with variable foci 3

NPRL3 · rs1898841618

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Standard

Severe myoclonic epilepsy in infancy

SCN1A · rs1573953706

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Standard

Epilepsy, idiopathic generalized, susceptibility to, 13

GABRA1 · rs2113293899

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Standard

Idiopathic generalized epilepsy

CACNA1H · rs200228767

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Standard

Progressive myoclonic epilepsy

GOSR2 · rs138510884

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Standard

Autosomal dominant epilepsy

SCN1A · rs776548109

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Standard

Idiopathic generalized epilepsy

CACNA1H · rs899082537

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Standard

Familial temporal lobe epilepsy 7

RELN · rs144387303

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Questions about variants on this site

What is a "variant" page on this site?

One specific position in the genome (an rsID), explained in plain language with what published research has found it linked to, and how strong that link actually is.

Where does new variant data come from?

The public GWAS Catalog, checked every twenty minutes, plus variants added manually after research review. Every one passes the same quality gate before publishing.

Does being listed here mean a variant causes a condition?

No. Listing reflects an association from published research, not a diagnosis or a cause. Most common variants shift probability modestly rather than determining an outcome.

Can I search this list by gene or rsID?

Yes — the search box above matches gene symbols and rsIDs as well as trait names.